New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5545321 =	NA (NA)	56 (0.870)	44/270	0.6	100%	intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	= 5621245	0 (0.000)					coding (19/774 nt)	PP_4939	hypothetical protein

GAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5545468‑5545321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGCTGTGCCG  <  NC_002947/5621245‑5621096                                                                                                                                                                                                                                                                                                             GAGAGTGGCCCAGATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTTGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAA                                                                                                                                                        >  3:209248/1‑149 GAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAA                                                                                                                                                        <  5:24075/149‑1  AGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACATCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAG                                                                                                                                                       >  5:84711/1‑149          CCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAA                                                                                                                                                        >  1:88566/1‑140          CCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAA                                                                                                                                                        <  2:88566/140‑1                    TCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑T                                                                                                                                    >  7:58797/1‑149                      GGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTG‑TTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGA                                                                                                                                  <  6:326323/148‑1                         GTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGAC                                                                                                                                 >  2:202340/1‑147                             ATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTT                                                                                                                            <  8:58797/148‑1                             ATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAA                                                                                                                                                        >  5:184198/1‑121                             ATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAA                                                                                                                                                        <  6:184198/121‑1                               CCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTG                                                                                                                         >  1:7500/1‑149                                CCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGG                                                                                                                        >  2:170009/1‑149                                CCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTG                                                                                                                         <  2:285670/148‑1                                 CTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGG                                                                                                                       <  6:193932/149‑1                                      GGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTT                                                                                                                  <  3:287433/149‑1                                      GGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTT                                                                                                                  >  5:33600/1‑149                                      GGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTT                                                                                                                  <  3:282411/149‑1                                      GGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGT                                                                                                                   <  5:195352/148‑1                                          CAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGAT                                                                                                              >  6:264227/1‑149                                          CAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGAT                                                                                                              <  2:7500/149‑1                                                GCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGC                                                                                                          <  5:305224/147‑1                                                 CTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCA                                                                                                       <  4:209248/149‑1                                                              TAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACA                                                                                                 >  6:126371/1‑142                                                              TAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACA                                                                                                 <  5:126371/142‑1                                                               AGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTT                                                                                            >  7:49982/1‑146                                                                   GAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGATTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGAGGTTCGATCTGCTCAAAGACACCCTTGAGAGTT                                                                                     >  5:292697/1‑149                                                                        AACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTT                                                                                                                  <  6:126820/115‑1                                                                        AACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTT                                                                                                                  >  5:126820/1‑115                                                                           ACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGTGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGC                                                                             >  8:99016/1‑149                                                                                GCCGCCATTGACCCCGCGCGCCTG‑TTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAA                                                                        >  3:379702/1‑148                                                                                 CCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGA                                                                                                   >  4:213172/1‑121                                                                                 CCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGA                                                                                                   <  3:213172/121‑1                                                                                  CGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGGAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCC                                                                                              <  6:386750/125‑1                                                                                  CGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGGAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACAACC                                                                                              >  5:386750/1‑125                                                                                   GCCATTGACCCCGCGCGCCTG‑TTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACC                                                                    <  4:379702/149‑1                                                                                          ACCCCGCGCGCCTATTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGA                                                                                                                                  <  2:332672/81‑1                                                                                          ACCCCGCGCGCCTATTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGA                                                                                                                                  >  1:332672/1‑81                                                                                                 GCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCG                                                       <  7:129360/149‑1                                                                                                  CGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGA                                                      <  6:33600/149‑1                                                                                                   GCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGTCGTCACGGTCGTCT‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGA                                                                                                   <  7:49890/103‑1                                                                                                   GCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGA                                                                                                   >  8:49890/1‑103                                                                                                                 CTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGC                                                                <  4:153812/124‑1                                                                                                                 CTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGC                                                                >  3:153812/1‑124                                                                                                                  TAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCG                                        >  3:236172/1‑147                                                                                                                  TAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGC                                                        >  6:119935/1‑131                                                                                                                  TAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGC                                                        <  5:119935/131‑1                                                                                                                                    ATCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCT                    >  3:284695/1‑149                                                                                                                                     TCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTT                                                                                    >  6:240796/1‑84                                                                                                                                     TCTTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTT                                                                                    <  5:240796/84‑1                                                                                                                                       TTTTGTTTGATAGAAGTGACGTCACGCTCGTCGTTGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTAT                                                 >  1:51290/1‑118                                                                                                                                       TTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTG                 >  3:25416/1‑149                                                                                                                                       TTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTG                 >  5:43654/1‑149                                                                                                                                       TTTTGTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTAT                                                 <  2:51290/117‑1                                                                                                                                           GTTTGATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATG             >  6:166110/1‑149                                                                                                                                               GATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGC         >  1:228270/1‑149                                                                                                                                               GATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGC         >  6:362736/1‑149                                                                                                                                               GATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGT                  <  5:118952/140‑1                                                                                                                                               GATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGT                  >  6:118952/1‑140                                                                                                                                                ATAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGCT        >  6:61184/1‑149                                                                                                                                                 TAGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGCT        <  2:228270/148‑1                                                                                                                                                  AGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACCCCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCTTCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGCTGT      >  1:127107/1‑149                                                                                                                                                  AGAAGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGCTGT      >  6:227841/1‑149                                                                                                                                                      GTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGCTGTGCCG  <  5:61184/149‑1                                                                                                                                                                                                                                                                                                             GAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTTCGCCGCCATTGACCCCGCGCGCCTGTTTTTTTCGCTAGAAAGAACAGTGGGTTATCTTTTGTTTGATAGAag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5545468‑5545321 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTGACGTCACGCTCGTCG‑TGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGACTCTGGCGACGATGCTGTGCATGCCGCTGTGCCG  <  NC_002947/5621245‑5621096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.