| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5914184 | 60 (0.920) | 9 (0.170) | 6/218 | 6.6 | 18.8% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | = 5914224 | 30 (0.580) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5914011‑5914184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctcttcgcgggcacg‑cccgctcccACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTGTACTCGA < NC_002947/5914224‑5914077 ACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGTATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGC > 2:171827/1‑149 CATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCC < 1:341610/149‑1 CATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCC < 6:206170/149‑1 ATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCC > 5:352390/1‑149 ATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCC > 3:194024/1‑149 ATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGCTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCC > 4:374877/1‑148 CGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTC > 2:358264/1‑149 TTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGG > 8:10879/1‑149 TCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGG > 8:236516/1‑149 CGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCGAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGG < 5:242660/147‑1 CGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGC < 3:223337/145‑1 GCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑C < 3:340150/149‑1 TGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCG > 4:82005/1‑149 CAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCT < 5:4431/149‑1 AAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTC > 5:86056/1‑149 AGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCC < 6:86056/149‑1 GGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCC < 1:375242/149‑1 GCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCACA‑GGTAA‑G > 4:327916/1‑149 GAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCACA‑GGTAA‑GTCA > 2:105064/1‑148 AGTTCGAGCGCTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCG > 1:285156/1‑127 AGTTCGAGCCCTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCG < 2:285156/127‑1 TTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGC > 6:395491/1‑114 TTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGC < 5:395491/114‑1 GATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCT > 6:248244/1‑97 GATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCT < 5:248244/97‑1 TCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGC > 8:352476/1‑148 TCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGC > 6:1763/1‑148 GAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGC < 5:1763/146‑1 GAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGC < 7:352476/146‑1 GAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACCCCAGCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCGCAGGGTAATTTCACAGGCTTCAGCCTTCGAAATTACCC < 1:127652/148‑1 CAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGG < 3:327916/149‑1 AACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGATCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGG < 1:105064/149‑1 gggccCGCCCCCTTCGCGGCCACG‑CCCGCTCCCACT‑GCTAA‑GTCACCGCCTCCACCCTTCGAAATACCCCTGCGGGAGCGGGCGGCCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGT < 1:239177/144‑1 TCTTCGCGGCCACG‑CCCGCTCCCACT‑GGTAA‑GTCACTGGGTTCCGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGC < 7:152528/131‑1 GGGCACG‑CCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGG > 6:394170/1‑148 CCCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTT < 5:394170/149‑1 ccgggCCCACC‑GTTAA‑GTCACTGGGTTCAGCCTTCGAATTTACCGTGCGGGAGCGGGGGTGCCGGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTG < 3:327294/144‑1 CCGCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTG > 2:331721/1‑149 GCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTGT > 5:355948/1‑148 GCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTT > 3:290375/1‑146 GCTCCCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTT < 4:290375/146‑1 CCACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTGTACTC > 4:122642/1‑148 CACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTGTACTCGA < 1:25891/149‑1 CACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTGTACTC > 3:82005/1‑147 ACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGC‑‑‑CGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACG‑CCCGCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5914011‑5914184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccctcttcgcgggcacg‑cccgctcccACA‑GGTAA‑GTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACACCGGTCTCAAACAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTACACGGTATGCAGGTACCAGTTGTACTCGA < NC_002947/5914224‑5914077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |