New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5545666	NA (NA)	85 (1.330)	59/268	0.1	100%	intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5621244 =	0 (0.000)					coding (20/774 nt)	PP_4939	hypothetical protein

ACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGGCTGCT  >  NC_002947/5545529‑5545811                                                                                                                                           |                                                                                                                                                  aCCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAggg                                                                                                                                        <  7:160257/149‑1 (MQ=35)   cATAGCAAAGTATTCGGCGGCTGACCTACGCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAgggg                                                                                                                                       >  5:304048/1‑148 (MQ=25)       gCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACg                                                                                                                                   >  2:31625/1‑148 (MQ=39)        cAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGc                                                                                                                                  >  5:359404/1‑148 (MQ=40)                  ggcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTg                                                                                                                        >  1:142514/1‑148 (MQ=255)                    cggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGTAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAg                                                                                                                     <  1:139952/149‑1 (MQ=255)                    cggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAg                                                                                                                     <  3:142173/149‑1 (MQ=255)                    cggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAg                                                                                                                     <  2:97995/149‑1 (MQ=255)                     ggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAggg                                                                                                                                        >  4:376242/1‑129 (MQ=35)                     ggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAggg                                                                                                                                        <  3:376242/129‑1 (MQ=35)                      gcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGa                                                                                                                   <  7:85527/149‑1 (MQ=255)                            cTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCAc                                                                                                                            >  8:337771/1‑134 (MQ=255)                            cTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCAc                                                                                                                            <  7:337771/134‑1 (MQ=255)                            cTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGt                                                                                                             >  7:257127/1‑149 (MQ=255)                             tACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTa                                                                                                                                             <  8:26265/116‑1 (MQ=31)                             tACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTa                                                                                                                                             >  7:26265/1‑116 (MQ=31)                               cccGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCggg                                                                                                              <  2:172722/145‑1 (MQ=255)                               cccGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCggg                                                                                                              >  1:172722/1‑145 (MQ=255)                               cccGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCa                                                                                                          >  1:327241/1‑149 (MQ=255)                                ccGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCAc                                                                                                         >  3:345374/1‑149 (MQ=255)                                 cGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCAcc                                                                                                        >  3:248226/1‑149 (MQ=255)                                       aGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGaa                                                                                                  <  4:330948/149‑1 (MQ=255)                                               aaTGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg                                                                                          <  4:248226/149‑1 (MQ=255)                                                    ttttCTACATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAg                                                                                     >  7:16181/1‑149 (MQ=255)                                                      ttCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAgg                                                                                    <  6:304048/148‑1 (MQ=255)                                                      ttCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAg                                                                                     <  2:142514/147‑1 (MQ=255)                                                      ttCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGc                                                                                   >  7:249711/1‑149 (MQ=255)                                                          aGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCt                                                                                  >  5:221654/1‑146 (MQ=255)                                                          aGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCAGCGAAGAGGCCGGAACAGGCt                                                                                  >  3:328679/1‑146 (MQ=255)                                                           gATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTga                                                                                <  2:172618/147‑1 (MQ=255)                                                             tctcGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGt                                                                            >  6:276033/1‑149 (MQ=255)                                                                 gATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGTGAGTCAg                                                                         <  8:30905/148‑1 (MQ=255)                                                                 gATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCa                                                                          <  7:214845/147‑1 (MQ=255)                                                                       aGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGa                                                                  <  7:90220/149‑1 (MQ=255)                                                                           cAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCTAGCCCGGAAGGGCTGGGTCATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGAcc                                                                >  1:267882/1‑148 (MQ=255)                                                                           cAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGAcc                                                                <  2:267882/147‑1 (MQ=255)                                                                           cAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTg                                                              >  6:297982/1‑149 (MQ=255)                                                                             gATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGcc                                                            <  1:31625/149‑1 (MQ=255)                                                                              aTCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTAc                                                                                                                                            >  1:186200/1‑68 (MQ=35)                                                                              aTCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTAc                                                                                                                                            <  2:186200/68‑1 (MQ=35)                                                                                  gACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGa                                                       >  2:337170/1‑149 (MQ=255)                                                                                   aCGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGAc                                                      <  5:276033/149‑1 (MQ=255)                                                                                     gTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACg                                                     >  6:300931/1‑148 (MQ=255)                                                                                         tGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACgg                                                <  8:16181/149‑1 (MQ=255)                                                                                             cATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTc                                            <  5:300931/149‑1 (MQ=255)                                                                                              aTCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCa                                                   >  1:244069/1‑141 (MQ=255)                                                                                              aTCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCa                                                   <  2:244069/141‑1 (MQ=255)                                                                                               tCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCg                                           >  6:299895/1‑148 (MQ=255)                                                                                                   gTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGaa                                         >  1:244698/1‑146 (MQ=255)                                                                                                    tttGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAAc                                        <  4:328679/146‑1 (MQ=255)                                                                                                     ttGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGa                                     >  1:138723/1‑148 (MQ=255)                                                                                                     ttGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGa                                     <  2:327241/148‑1 (MQ=255)                                                                                                         tgtgCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAAc                                >  3:53991/1‑149 (MQ=255)                                                                                                              gACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGa                                                                  >  6:116288/1‑110 (MQ=255)                                                                                                              gACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGa                                                                  <  5:116288/110‑1 (MQ=255)                                                                                                              gACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCgg                           >  4:226488/1‑149 (MQ=255)                                                                                                              gACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCgg                           >  7:314989/1‑149 (MQ=255)                                                                                                               aCAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGt                          >  5:242005/1‑149 (MQ=255)                                                                                                                    gc‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCa                     <  2:244698/149‑1 (MQ=255)                                                                                                                         cccGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGa                 >  6:66556/1‑149 (MQ=255)                                                                                                                         cccGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGa                 <  4:345374/149‑1 (MQ=255)                                                                                                                           cGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGaca               <  6:359404/149‑1 (MQ=255)                                                                                                                           cGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGaca               <  8:257127/149‑1 (MQ=255)                                                                                                                            ggAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGacac              >  5:289964/1‑149 (MQ=255)                                                                                                                            ggAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGacac              <  4:53991/149‑1 (MQ=255)                                                                                                                             gAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACg             <  3:226488/149‑1 (MQ=255)                                                                                                                                 ggCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTaa         <  5:299895/149‑1 (MQ=255)                                                                                                                                   cTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAgg       <  5:297982/149‑1 (MQ=255)                                                                                                                                      ggTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGgctg    >  2:204275/1‑149 (MQ=255)                                                                                                                                        tGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGgctgct  <  5:66556/149‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                  ACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGC‑AGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAACAGACAAACCCCGGTCGCCACCGACACGTTAAGGCTGCT  >  NC_002947/5545529‑5545811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.