New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5594092 =	47 (0.720)	7 (0.140)	7/218	6.1	15.3%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594185 =	40 (0.770)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCAGGCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGG  >  NC_002947/5593944‑5594231                                                                                                                                                     |                                                                                                                                            aTCAGGCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATAcacca                                                                                                                                             >  2:387227/1‑149 (MQ=255)  tCAGGCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATAcaccac                                                                                                                                            <  2:121577/149‑1 (MQ=255)     ggCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCt                                                                                                                                         <  5:91842/149‑1 (MQ=255)      gCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGTGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCtg                                                                                                                                        >  7:198325/1‑149 (MQ=255)       ccGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCtgt                                                                                                                                       <  1:387227/149‑1 (MQ=255)        cGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAACTGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAAGTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCtgtg                                                                                                                                      >  8:93457/1‑149 (MQ=255)         gATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTgg                                                                                                                                     <  1:334275/149‑1 (MQ=255)         gATGACGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTgg                                                                                                                                     <  6:194667/149‑1 (MQ=255)              cGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCg                                                                                                                                >  8:306046/1‑149 (MQ=255)              cGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCg                                                                                                                                <  7:148612/149‑1 (MQ=255)                  ggAAAACCACAGTGAAAACAGGTGGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGc                                                                                                                             <  5:195256/148‑1 (MQ=255)                    aaaaCCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGc                                                                                                                                 >  5:158872/1‑142 (MQ=255)                    aaaaCCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGc                                                                                                                                 <  6:158872/142‑1 (MQ=255)                    aaaaCCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTg                                                                                                                          >  3:281886/1‑149 (MQ=255)                       aCCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGccc                                                                                                                       >  4:289808/1‑149 (MQ=255)                         cacaGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCcgc                                                                                                                     >  6:100308/1‑149 (MQ=255)                                       gTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCgg                                                                                                            <  6:278379/144‑1 (MQ=255)                                       gTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCgg                                                                                                            >  5:278379/1‑144 (MQ=255)                                        tCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGc                                                                                                      <  3:289808/149‑1 (MQ=255)                                                  cGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGGCCGCGGAAACCCGCAAAGCCCGTGCCATg                                                                                            >  3:200866/1‑149 (MQ=255)                                                    aaaaTGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCa                                                                                          <  5:100308/149‑1 (MQ=255)                                                          cgcTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACTCCGGCAAAGCCGGTGCCATGCACCGCAg                                                                                    <  4:281886/149‑1 (MQ=255)                                                               ctgGATGGGGATGGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgc                                                                                 <  7:295911/147‑1 (MQ=255)                                                                tgGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgcttg                                                                              <  8:198325/149‑1 (MQ=255)                                                                tgGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGtgctt                                                                               >  7:90075/1‑148 (MQ=255)                                                                 ggATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGCGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTTGCCGCGAACAACCGCAAAGCCCCTGGCATTCAACCCAGtgcttgc                                                                             >  1:138294/1‑149 (MQ=255)                                                                   aTGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCCCGCACAACCGCAAAGCCGGGGCCCAGCACCCCAGtgagtgaa                                                                            >  2:197297/1‑142 (MQ=255)                                                                                      gagagaACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTcc                                                         >  8:299250/1‑148 (MQ=255)                                                                                                  tggGTGATGTCATGGTCATGTCCGAAGTAGTGATGTTAAGTGGAATACACCACCCTGTGGTTGCGGGCTTGCCCGCTAACACCGGCAAAGCCGGTGCAATGCACCTCAGTGCTTGCTTCGCGGGAAAGCCCGCTCCCACAGGGTAAGGt                                            <  8:90075/149‑1 (MQ=37)                                                                                                    ggTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACACGGTAAGGtgc                                          >  4:39502/1‑149 (MQ=255)                                                                                                       gATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGc                                                                                                           <  6:111973/81‑1 (MQ=255)                                                                                                       gATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGc                                                                                                           >  5:111973/1‑81 (MQ=255)                                                                                                             atggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCACAGCCGGTGCCATGCACCGCAGTGCTTGCATCGCGGGCCAGCCCGCTCCCACAGGGTAAGGTGCTGCGGtt                                   >  8:355748/1‑147 (MQ=255)                                                                                                              tgtgaatgTCCGCCGGTGTGATGTTACGTGGCATCCCCCACCCTGGGGGCGCGGGCTTGCCCGCGAACACCGGAAACGCCGGTGCCATGCACCGCAGTGCTTGCTGCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTa                                 <  2:245380/143‑1 (MQ=25)                                                                                                              tggtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGGCCGCGAACACCGGCAAAGCCGGTGGCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGGGGTTTAg                                >  1:245380/1‑149 (MQ=255)                                                                                                                gtcatgTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGGCCGCGAACACCCGCAAAACCCGTGCCCTGACCCCCAGGGCATGCTTAGCGGGGAAGCCCCCGCCCCACGGGTTAGGTGGGGCGGGTTTGAc                              >  8:309028/1‑149 (MQ=19)                                                                                                                        cGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCGTGGCCGCCGACACCCGCCAAGCCCGGGCCATGCACCCGAATGGGTTCGTCGCGGGGAAGCCCGCGCCCACCGGGGAAGGTGCTGCGGGTTAGACGTTGTggg                      >  2:353758/1‑148 (MQ=255)                                                                                                                              aGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgct                >  5:130011/1‑149 (MQ=255)                                                                                                                                tGATGTTAAGTGGCATACACTACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctgg              >  7:305250/1‑149 (MQ=255)                                                                                                                                tGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctgg              <  6:130011/149‑1 (MQ=255)                                                                                                                                tGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctgg              >  6:83548/1‑149 (MQ=255)                                                                                                                                   tGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGACATGCACCGCAGTGCTTGATTCGCGGGCAAGCTCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAgctggatg           >  3:348626/1‑149 (MQ=255)                                                                                                                                    gTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGtg                                           >  7:271030/1‑116 (MQ=255)                                                                                                                                    gTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCg                                      >  8:252969/1‑121 (MQ=255)                                                                                                                                    gTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCg                                      <  7:252969/121‑1 (MQ=255)                                                                                                                                           ggCATACACCACCCTGTGGGTGCGGGCTTGCCCGCTAACACCGGCAATGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCt    <  7:93457/148‑1 (MQ=255)                                                                                                                                            gCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTgg  >  2:274343/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                            ATCAGGCCGATGCCGAGGGAAAACCACAGTGAAAACAGGTCGCGAGCACCGAAAATGCGCTGCTGGATGGGGATTGGATGGTCGGGAGAGAACTGGCTGGGTGATGTCATGGTCATGTCCGCAGGAGTGATGTTAAGTGGCATACACCACCCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCAGTGCTTGCTTCGCGGGCAAGCCCGCTCCCACAGGGTAAGGTGCTGCGGTTTAGACTTTGTGGTACAGCTGGCTGCCTTCCTGG  >  NC_002947/5593944‑5594231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.