Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947195,5590CA31.4% 143.7 / 66.9 86T355T (ACC→ACA) PP_0168putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base C (28/31);  new base A (15/12);  total (43/43)
Fisher's exact test for biased strand distribution p-value = 6.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.13e-02
Rejected as consensus: Frequency below/above cutoff threshold.

CCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACC  >  NC_002947/195411‑195707
                                                                                                                                                      |                                                                                                                                                      
cccAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCAcc                                                                                                                                                        >  6:73014/1‑149 (MQ=32)
 ccAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACcg                                                                                                                                                       >  2:301758/1‑149 (MQ=32)
         cGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGt                                                                                                                                                  <  4:132955/146‑1 (MQ=32)
         cGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGt                                                                                                                                                  >  3:132955/1‑146 (MQ=32)
         cGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAAt                                                                                                                                               <  2:291315/149‑1 (MQ=35)
            tgaccgtgaccCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTc                                                                                                                                            <  6:198840/149‑1 (MQ=35)
            tgaccgtgaccCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTc                                                                                                                                            <  2:353131/149‑1 (MQ=35)
              accgtgaccCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGa                                                                                                                                          <  4:151724/149‑1 (MQ=34)
                cgtgaccCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑g                                                                                                                                       >  2:385190/1‑148 (MQ=35)
                cgtgaccCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑g                                                                                                                                       <  1:385190/148‑1 (MQ=35)
                cgtgaccCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑g                                                                                                                                       >  3:367849/1‑148 (MQ=35)
                       cTGTCCAACGGCCAGGTCATCACTCTTGAAGCCGGAAAAACCCAGGGCAGCGTCGATGTCCAGACCACGCCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACTCCACCGGCGGTAATTTCGA‑‑GCAACTGaa                                                                                                                               >  5:178856/1‑148 (MQ=14)
                          tCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGAccc                                                                                                                             <  1:276111/148‑1 (MQ=39)
                            cAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCg                                                                                                                           >  7:158210/1‑148 (MQ=39)
                               cGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATc                                                                                                                       <  4:204194/149‑1 (MQ=40)
                                gtccAGGTCATCACTGTTTAAGCCGTCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACAGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATcc                                                                                                                      <  8:158210/147‑1 (MQ=255)
                                ggCCAGGTCATCACTGTTGAAGCCGGCAAAACCGAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATcc                                                                                                                      <  4:367849/149‑1 (MQ=255)
                                    agttcatcaATGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAAGGCTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCTGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGAcc                                                                                                                  <  6:178856/146‑1 (MQ=14)
                                    aGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGAcc                                                                                                                  <  1:301758/149‑1 (MQ=255)
                                      gTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGAcccc                                                                                                                >  7:60659/1‑149 (MQ=255)
                                         atcaCTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGAc                                                                                                                   >  7:269256/1‑143 (MQ=255)
                                         atcaCTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGAc                                                                                                                   <  8:269256/143‑1 (MQ=255)
                                              tGTTGAATCCGGCAAAACCCATGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGa                                                                                                        <  3:32167/149‑1 (MQ=255)
                                               gTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGAc                                                                                                       >  1:245463/1‑149 (MQ=37)
                                                  gAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCa                                                                                                     <  5:73014/148‑1 (MQ=37)
                                                   aaGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCCCGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCa                                                                                                     <  1:303938/149‑1 (MQ=255)
                                                        ggCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAAACCGACCCCGGCTCAGACCACGATCaa                                                                                              >  4:293577/1‑149 (MQ=37)
                                                         gCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAAc                                                                                             >  4:118003/1‑149 (MQ=37)
                                                           aaaaCCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGa                                                                                           <  2:245463/149‑1 (MQ=37)
                                                              aCCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACAAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTc                                                                                        >  2:386807/1‑149 (MQ=21)
                                                                 cAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGt                                                                                     <  8:60659/149‑1 (MQ=34)
                                                                  aGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTc                                                                                    <  3:118003/149‑1 (MQ=34)
                                                                         cGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGAcacca                                                                             >  3:139711/1‑149 (MQ=38)
                                                                                   cAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAc                                                                   >  4:191624/1‑149 (MQ=39)
                                                                                    aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCa                                                                                                     <  7:184535/114‑1 (MQ=35)
                                                                                    aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCa                                                                                                     >  8:184535/1‑114 (MQ=35)
                                                                                    aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGAcc                                                                  <  3:191624/149‑1 (MQ=39)
                                                                                      aCCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCt                                                                >  4:68725/1‑149 (MQ=39)
                                                                                        cccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGa                                                              >  2:283336/1‑149 (MQ=39)
                                                                                        cccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGa                                                              >  7:341527/1‑149 (MQ=39)
                                                                                         ccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTc                                                                                                           >  4:296460/1‑103 (MQ=35)
                                                                                             ccAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCg                                                         <  7:157880/149‑1 (MQ=38)
                                                                                               aaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTAGACACCACTACCGCGACCCTGACGGCGAg                                                       >  8:254071/1‑149 (MQ=12)
                                                                                                aTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGc                                                      >  5:161983/1‑149 (MQ=17)
                                                                                                  gACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGccc                                                    >  6:221630/1‑149 (MQ=17)
                                                                                                      tCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGGCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCg                                                <  4:222392/149‑1 (MQ=12)
                                                                                                      gcTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCg                                                <  4:45365/148‑1 (MQ=17)
                                                                                                        tACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGt                                              >  4:194421/1‑149 (MQ=37)
                                                                                                        tACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGAGGGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGt                                                  >  1:304191/1‑147 (MQ=11)
                                                                                                         acaacaACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGAGCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAg                                                       <  2:285765/139‑1 (MQ=37)
                                                                                                         acaacaACGGTTCCACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAg                                                       >  1:285765/1‑139 (MQ=37)
                                                                                                          caacaaCGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCa                                            >  7:121912/1‑149 (MQ=17)
                                                                                                           aacaacGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAc                                           >  4:161375/1‑149 (MQ=17)
                                                                                                            acaacGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAcc                                          <  6:361018/149‑1 (MQ=17)
                                                                                                             caacGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAcc                                          >  5:318943/1‑148 (MQ=17)
                                                                                                               acGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCg                                         >  4:185674/1‑147 (MQ=37)
                                                                                                                 ggTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAgg                                     <  1:17931/149‑1 (MQ=17)
                                                                                                                 ggTACGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAgg                                     >  1:184151/1‑149 (MQ=37)
                                                                                                                  gTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggc                                    <  6:161983/149‑1 (MQ=17)
                                                                                                                   ttCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGac                                                                                 >  4:344832/1‑103 (MQ=33)
                                                                                                                   ttCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGac                                                                                 <  3:344832/103‑1 (MQ=33)
                                                                                                                      gACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc                                 <  3:293577/148‑1 (MQ=37)
                                                                                                                      gACCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg                                <  8:121912/149‑1 (MQ=17)
                                                                                                                       aCCGTCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCAGTCACCGAAGGCGGCGt                               <  2:304191/149‑1 (MQ=12)
                                                                                                                           tCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCg                                                >  3:138535/1‑128 (MQ=38)
                                                                                                                           tCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCg                                                <  4:138535/128‑1 (MQ=38)
                                                                                                                           tCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGa                                                        >  5:322329/1‑120 (MQ=12)
                                                                                                                           tCAGCGTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGa                                                        <  6:322329/120‑1 (MQ=12)
                                                                                                                                gTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑CCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTa                      <  3:198327/149‑1 (MQ=255)
                                                                                                                                gTCACCAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGCTCACTTa                      <  7:254071/149‑1 (MQ=12)
                                                                                                                                    ccAT‑‑CTAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGAc                                                                   <  2:386820/100‑1 (MQ=255)
                                                                                                                                    ccAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGAc                                                                   >  1:386820/1‑100 (MQ=16)
                                                                                                                                     cAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGCCCCTGACGGCGAGCCCGGCGGTCCCCGAAGGCGGCGTGATCACTTACACCg                 >  6:283416/1‑149 (MQ=255)
                                                                                                                                     cAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg                 >  1:116581/1‑149 (MQ=39)
                                                                                                                                     cAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc                                 <  2:1331/133‑1 (MQ=17)
                                                                                                                                     cAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc                                 >  1:1331/1‑133 (MQ=17)
                                                                                                                                     cAT‑‑CGAGAACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg                 >  4:255350/1‑149 (MQ=17)
                                                                                                                                       t‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGt                >  4:251955/1‑148 (MQ=39)
                                                                                                                                           gagaACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa              <  3:194421/148‑1 (MQ=39)
                                                                                                                                           gagaACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa              <  3:68725/148‑1 (MQ=39)
                                                                                                                                            agaACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGc                                                      >  1:151137/1‑107 (MQ=12)
                                                                                                                                            agaACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAcc            >  4:279584/1‑149 (MQ=17)
                                                                                                                                             gaACGCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCAGTTACACCGGGcccc           >  4:281846/1‑149 (MQ=11)
                                                                                                                                                cGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa        <  4:139711/149‑1 (MQ=39)
                                                                                                                                                 gCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAg       <  1:283336/149‑1 (MQ=39)
                                                                                                                                                 gCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAg       >  8:304155/1‑149 (MQ=39)
                                                                                                                                                 gCCACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAg       <  3:279584/149‑1 (MQ=17)
                                                                                                                                                  ccACAGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAg       >  8:332963/1‑148 (MQ=17)
                                                                                                                                                      cggcggTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc  <  8:341527/149‑1 (MQ=39)
                                                                                                                                                      |                                                                                                                                                      
CCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCAT‑‑CGAGAACGCCACCGGCGGTAATTTCGA‑‑GCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACC  >  NC_002947/195411‑195707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑