| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 196,390 | 0 | T | C | 30.3% | 99.6 / 55.5 | 76 | D632D (GAT→GAC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base T (25/28); new base C (11/12); total (36/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCA > NC_002947/196242‑196532 | cccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGAt < 2:9863/149‑1 (MQ=34) aCGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTc < 3:135149/147‑1 (MQ=34) ggCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGa > 7:87028/1‑149 (MQ=34) gTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCg > 2:353800/1‑148 (MQ=255) ggTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAAt < 8:87028/148‑1 (MQ=34) ggTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAAt < 8:90338/148‑1 (MQ=34) gTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGa > 8:160145/1‑149 (MQ=255) gTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGa > 2:85184/1‑149 (MQ=255) tCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGAc > 4:95303/1‑149 (MQ=34) aCCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGAc < 6:186109/147‑1 (MQ=34) aCCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGAc > 5:186109/1‑147 (MQ=34) gAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCt > 7:100145/1‑148 (MQ=255) gAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCt < 8:100145/148‑1 (MQ=255) aaGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGCTCGACTTCCAGACCCCGGCGAATGACGTCTa < 1:40381/149‑1 (MQ=11) aaGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTac < 5:347135/149‑1 (MQ=255) ggcgTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCgg > 4:350781/1‑130 (MQ=255) ggcgTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCgg < 3:350781/130‑1 (MQ=255) cgTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACg < 5:134549/149‑1 (MQ=255) gATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt > 6:74556/1‑149 (MQ=34) aCTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGa < 7:173848/148‑1 (MQ=255) cTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACt < 7:160145/149‑1 (MQ=255) cTTACACCGTGACACTGAGCAATCCTGCCCAGACGGCGGGGACAGTGACGGTGTCCAACGGCCAAACCATTACCGTTGTAGCCGGGAAATCCCAGGGCAGCG‑GCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACt < 6:292420/149‑1 (MQ=11) ttACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTg > 6:26343/1‑149 (MQ=34) ttACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTg > 7:51770/1‑149 (MQ=34) ttACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGAc < 1:35298/127‑1 (MQ=255) ttACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGAc > 2:35298/1‑127 (MQ=255) ttACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTg > 6:154461/1‑149 (MQ=255) acacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGt < 2:205708/148‑1 (MQ=34) acacCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGc > 5:103917/1‑118 (MQ=11) acacCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGc < 6:103917/118‑1 (MQ=11) acacCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAAt > 8:172111/1‑122 (MQ=255) acacCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAAt < 7:172111/122‑1 (MQ=255) cacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTacaa > 2:134074/1‑132 (MQ=32) cacCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTacaa < 1:134074/132‑1 (MQ=32) cacCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGt > 1:268434/1‑147 (MQ=255) cacCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCa < 5:154461/149‑1 (MQ=255) acCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt < 7:235997/139‑1 (MQ=32) acCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt > 8:235997/1‑139 (MQ=32) acCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAg < 5:74556/149‑1 (MQ=34) ccGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgt > 7:5928/1‑149 (MQ=35) ccGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgt < 7:291723/149‑1 (MQ=35) cGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgcg > 2:33290/1‑147 (MQ=255) gTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCTGCAAGACCCAGTGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgtgt < 8:233619/149‑1 (MQ=12) aCCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCa < 8:5928/148‑1 (MQ=37) aCCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCAc < 8:51770/149‑1 (MQ=37) ccTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCAcc > 6:44477/1‑148 (MQ=37) ccTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCGACACCAACGGTTCGACTGTCAGGGTCAcc > 8:319077/1‑148 (MQ=255) aGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATc < 5:187750/147‑1 (MQ=37) gCAACCCTGCCCAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGa < 6:35295/129‑1 (MQ=255) cAATCCTGCCCAGCCGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCgag > 7:302266/1‑148 (MQ=37) cTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGt < 1:211553/106‑1 (MQ=32) cTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGt > 2:211553/1‑106 (MQ=32) cccAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCAcc > 6:158364/1‑149 (MQ=38) ccAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACcg > 7:125864/1‑149 (MQ=38) cAGACGCCGGTGACAGTGACCCTGTCCAACGTCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACcgg < 7:319077/149‑1 (MQ=255) cAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCTTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACcgg < 5:68824/149‑1 (MQ=255) cAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGAc < 6:178469/99‑1 (MQ=33) cAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGAc > 5:178469/1‑99 (MQ=33) gACGCCGGGGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAgtgt < 5:355191/126‑1 (MQ=38) tGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTc < 4:169476/149‑1 (MQ=39) aCAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGa < 3:377600/149‑1 (MQ=39) tGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCaa > 4:124552/1‑149 (MQ=37) tCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCACGGCGAATGACGTCTACAACACCGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGAcccc > 7:251531/1‑149 (MQ=255) cAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCg > 3:141782/1‑148 (MQ=37) cAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGa < 3:124552/149‑1 (MQ=37) aaCGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGa > 5:355671/1‑148 (MQ=37) aTTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGc > 3:329737/1‑149 (MQ=39) ttACCTTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCt < 5:26343/149‑1 (MQ=255) ccGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCa < 5:44477/148‑1 (MQ=39) ccGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCa < 8:302266/148‑1 (MQ=39) aaGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACAATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACAAc > 3:336190/1‑148 (MQ=255) gCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGAt < 4:329737/149‑1 (MQ=39) aCCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTc > 4:52479/1‑149 (MQ=39) cccAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACACCGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCg < 8:251531/149‑1 (MQ=255) cAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGt > 4:6480/1‑149 (MQ=39) aGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCAGGCTCAGACCACGATCAACGACTCGGTc > 7:348693/1‑149 (MQ=255) cG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGcca < 5:158364/149‑1 (MQ=39) | CCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCG‑TCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGTGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCA > NC_002947/196242‑196532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |