Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	1,419,549	+C	intergenic (‑38/+98)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,419,548	1	.	C	100.0%	190.1 / NA	56	intergenic (‑37/+99)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (28/28);  total (28/28)

CTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGG‑CTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGAC  >  NC_002947/1419401‑1419683                                                                                                                                                       |                                                                                                                                        cTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGggctgg                                                                                                                                          <  5:200971/148‑1 (MQ=255) cTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCAGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGggctgg‑c                                                                                                                                        <  6:271469/149‑1 (MQ=255)    gCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGggctgg‑cctc                                                                                                                                     >  8:217673/1‑146 (MQ=255)      aGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGggctgg‑cctctt                                                                                                                                   >  7:269984/1‑144 (MQ=255)        gggATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTcg                                                                                                                                  >  3:186278/1‑149 (MQ=255)           aTGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCgg                                                                                                                               >  6:83966/1‑149 (MQ=255)              ccGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCa                                                                                                                            <  3:155029/149‑1 (MQ=255)                         gCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCTGGCACGCCCGCTcc                                                                                                                  <  6:154174/148‑1 (MQ=255)                           ggAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCGTGCCCGcgaagag                                                                                                               <  8:269984/149‑7 (MQ=255)                           ggAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCca                                                                                                                >  6:228532/1‑148 (MQ=255)                                   gggTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACtg                                                                                                       >  5:173738/1‑149 (MQ=255)                                    ggTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACtgt                                                                                                      <  5:228532/149‑1 (MQ=255)                                       gAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACtgtg                                                                                                     >  1:253991/1‑148 (MQ=255)                                            ttgttTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCg                                                                                              >  7:234325/1‑149 (MQ=255)                                             tgttTTCGCCTTGGTAGAAGCAGGTATT‑TCCGACTGTGGAGTGTTCTGTTGTGATGTCGGTGGCCATTGTTTTGTTTACCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCAGCTCCCAAAGGTACTGTGCAGTGCGt                                                                                             >  1:183646/1‑149 (MQ=255)                                                  tCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACg                                                                                         <  4:186278/148‑1 (MQ=255)                                                    gCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGcc                                                                                                                        <  6:269899/115‑1 (MQ=255)                                                    gCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGcc                                                                                                                        >  5:269899/1‑115 (MQ=255)                                                    gCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCt                                                                                      >  6:148415/1‑149 (MQ=255)                                                     ccTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCtg                                                                                     >  7:298929/1‑149 (MQ=255)                                                       ttGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGa                                                                                           <  7:29117/141‑1 (MQ=255)                                                       ttGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGa                                                                                           >  8:29117/1‑141 (MQ=255)                                                         ggTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCtgtg                                                                                   <  6:387869/147‑1 (MQ=255)                                                               aGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGGGTGACGGGTGTGGTGGcccg                                                                           >  1:356323/1‑148 (MQ=39)                                                                  aGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCtgtg                                                                        <  8:234325/149‑1 (MQ=255)                                                                   ggTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                       <  5:148415/149‑1 (MQ=255)                                                                   ggTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                       <  5:83966/149‑1 (MQ=255)                                                                   ggTCGT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                       <  2:386557/149‑1 (MQ=255)                                                                    gTCTT‑GCCGACTGTGGTGGGTTCTTTTGTGTTGTCGGTGTGGATTGGTTTTTTTCCCTGGATTGTG‑GGTTGGCTTGGCTGGCCTCTTCGCGGGCACTCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTggg                                                                      <  2:183646/149‑1 (MQ=37)                                                                    gTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                       >  7:262106/1‑148 (MQ=255)                                                                    gTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACCCCCCCAACCACAAGTACTTTGCAGTTCGTGACGGCTGTGGTGACCCTGTggg                                                                      >  8:1108/1‑149 (MQ=255)                                                                     tCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                       >  7:30691/1‑147 (MQ=255)                                                                          gCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGc                                                                   <  2:253991/147‑1 (MQ=255)                                                                          gCCGACTGTGGTGGGTTCTGTTGTGTGGTCGGGGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTGGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCg                                                                  <  1:266533/148‑1 (MQ=38)                                                                                  tggtggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGccc                                                         <  6:173738/149‑1 (MQ=255)                                                                                  tggtggGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGccc                                                         <  8:30691/149‑1 (MQ=255)                                                                                         ttCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGaa                                                    >  7:107302/1‑147 (MQ=255)                                                                                         ttCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAagc                                                  >  6:94265/1‑148 (MQ=255)                                                                                            tgttgtgttgTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACCCCCGCTACCACAGGGTCATTGGAGTGCGTGTCGGGAGTGGTGACCCTCTGGGAACGGGCGAGACCGGCAACAGGc                                               >  3:66631/1‑149 (MQ=255)                                                                                             gttgtgttgtCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGCGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAATGTGCAGTGGGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGc                                               >  1:76420/1‑149 (MQ=37)                                                                                              ttgtgttgtCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAGTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCt                                             >  3:321094/1‑149 (MQ=255)                                                                                                gtgttgtCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGGGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTg                                            <  7:217673/148‑1 (MQ=255)                                                                                                      tCGGTGGGCTTTGTTTTGTTTCCGTGTATTCTG‑GGTTGCCTGGGTTGGCCTATTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTCACGGCTGTGGTGACCCTTTGGTAGGGGGGGTGCCCGCGAAGAGGCCTGACCTGCt                                     <  2:76420/149‑1 (MQ=25)                                                                                                      tCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACAGTGCAGTGCCTGAAGGCTGTAGTGAACCTGTGGGAGCGGGCGTGCCCGCCAAGAAGCCTGACCTGc                                      >  4:299304/1‑148 (MQ=25)                                                                                                      tCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCAACCACACGTACTGTTCAGTGCGTGACGGCTGTGGTGACCCAGTGGGAGGCGGGGTGCCCCCCAAGAAGCCTGaacagc                                      >  4:234914/1‑143 (MQ=255)                                                                                                        ggTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTaa                                   >  5:168463/1‑149 (MQ=255)                                                                                                              cATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACCGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAg                             <  5:94265/149‑1 (MQ=255)                                                                                                              cATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAg                             >  7:105569/1‑149 (MQ=255)                                                                                                                 ggttttgtttCCCTGGATTCTG‑GGTGGCCTGGGCTGGCCTCTTCGCGGGAACGCCCGCTCCCACAGGTACTGTGCTGTGCGTGACGGCTGTGGTGACCCTGTGGTTGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGgt                           <  4:321094/147‑1 (MQ=37)                                                                                                                     ttgtttCCCTGGAGTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACCGGTCCTGTGCAGTGCGTGACGGCTGTGGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGa                       <  3:234914/148‑1 (MQ=37)                                                                                                                        tttCCGTGGATTCTG‑GGTGGCCTGGGCGGGCCGCTTCGCGGGCACGCCCGCTCCCCCCGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGGGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGct                   <  8:298929/149‑1 (MQ=37)                                                                                                                            ccTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCCCCCCCCCACCCACAGGGACAGTTGACTTGGGGGAGGCGGTTGTGACCCAGTGGGAGCGGGGGTGCCCGCGGAGAGGCCTGCCCTTCGAATGGAACGGGTGTGGcgcagt               >  4:311324/1‑144 (MQ=255)                                                                                                                            ccTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCCCACCCCCAGGTTCGGTGCAGTGCGTGACGGCTGTGGGGCCCCGGTGGGAGCGGGCGGGCCCGCGAAGAGGCCTGACCGGGGAAAGCAAGGTGTGAGGCGCtgg               >  4:34632/1‑148 (MQ=25)                                                                                                                             cgggATTCTG‑GGGTGCCTGGGCTGGCCTGTTCGGGGGAACGCCCGCTCCCACCGGAAGTGTGCAGTGCGTGAGGGCTGTGGGTACCCTGGGGGCGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCtgtg              <  7:1108/147‑1 (MQ=255)                                                                                                                             cTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                 >  7:320075/1‑98 (MQ=255)                                                                                                                             cTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCgg                                                                 <  8:320075/98‑1 (MQ=255)                                                                                                                             cTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGGGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCtgtg              <  7:356735/149‑1 (MQ=255)                                                                                                                             cTGGATTCTG‑GGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAAGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATTCAAAGTGTGATGCTCtgtg              >  8:356735/1‑149 (MQ=37)                                                                                                                                        ggTTGCCTGGGCTGGCCGCTTGGCGGGCAGGCCCGCTCCCTCAGTTACTGTGCTGTGCGGGACGGCTGTGGTGACCGTGTGTGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAAt       <  3:299304/146‑1 (MQ=37)                                                                                                                                          ttGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGGGTGACGGCTGTGGTGACCCTGTGGTAGGGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGAc  <  8:107302/149‑1 (MQ=38)                                                                                                                                                       |                                                                                                                                        CTGGCAGGGGATGCCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTT‑GCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTG‑GGTTGCCTGGGCTGG‑CTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGAC  >  NC_002947/1419401‑1419683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑