| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,911,791 | Δ1 bp | 7.6% | coding (390/477 nt) | ccmH ← | cytochrome c heme lyase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,911,791 | 0 | A | . | 7.6% | 284.0 / 17.7 | 92 | coding (390/477 nt) | ccmH | cytochrome c heme lyase subunit |
| Reads supporting (aligned to +/- strand): ref base A (42/43); new base . (2/5); total (44/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.32e-01 | |||||||||||
GATCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATGAAGTCGAT > NC_002947/4911643‑4911937 | gATCGGGATCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTa < 8:367004/149‑1 (MQ=255) cagcaAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCGTGCTACGGCCGT‑GCAGGgcgc < 2:352344/149‑1 (MQ=255) cagcaAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTATTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCGTGCTACGGCCGT‑GCAGGgcgc < 1:140065/149‑1 (MQ=255) caAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCga < 2:80211/149‑2 (MQ=255) caAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCgg > 8:88043/1‑149 (MQ=255) caAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCAAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGAACGGCGCCgg > 3:92525/1‑149 (MQ=255) aaaaaGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCgat < 1:296566/149‑3 (MQ=255) aaaaaGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGc < 1:375584/149‑1 (MQ=255) aaaaaGATGATGGCAGCGAGCAGCAGAAGGCCCGCTCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGc < 4:92525/149‑1 (MQ=255) aaaGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGCGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGt < 3:370183/149‑1 (MQ=255) aaGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTa < 7:152825/149‑1 (MQ=255) aGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCATAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTAc < 6:342168/149‑1 (MQ=255) aGCTGAGGGCAGCGAGCACCATAAGGCCCTCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTAc < 8:253415/149‑1 (MQ=255) gCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACg < 8:332179/149‑1 (MQ=255) gAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGGTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGAt > 4:406130/1‑148 (MQ=255) agcagAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGcacca > 7:91440/1‑149 (MQ=255) cagAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGcaccac > 1:352493/1‑148 (MQ=255) agAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACg > 8:354806/1‑148 (MQ=255) taaGGGCCGGGCTTAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa < 5:276691/148‑1 (MQ=255) gAAGGCCCGCGCTAAGCCAGAATTCAATCATGTGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa < 6:403787/149‑1 (MQ=255) gAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa < 1:410822/149‑1 (MQ=255) gAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGaa > 7:360569/1‑149 (MQ=255) ccGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCAcc > 2:389704/1‑149 (MQ=255) cgcgCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCg > 7:328404/1‑149 (MQ=255) cTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGTACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCa < 8:140606/149‑1 (MQ=255) aGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCa < 7:354806/149‑1 (MQ=255) ccAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCTAACGGCAGACAAATCATCGGCGCCCTGC‑ACGGCCTTACAACGCCCCCGCCGAACGATAACCGCCACCACAACTAAGCCACCGGCCAGCa > 1:342095/1‑148 (MQ=255) ccAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑CCGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCCGc > 6:214954/1‑146 (MQ=255) ccAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAg < 1:236171/149‑1 (MQ=255) gacctacAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAg < 1:379314/141‑1 (MQ=255) gAATTCAATCATGTGTCTGTTCTTTTTCCAGCAGTTTGCTCAATACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGAt < 1:363721/149‑1 (MQ=255) gAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATc > 8:33070/1‑149 (MQ=255) cAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCgg > 3:13438/1‑149 (MQ=255) aaTCTTGGGTCTTTTCTTTTTGCTGCAGTTTG‑GCGTGACGCTCGCGTTCT‑TCGGCAGAGAACTCATCGGCGCCGTGC‑TCGGCCGTAGGAAGGCGCCGGCGTACGATCACCGCCAGCACCTCGAAGCCAGCTGGCAGCAAGATCCCCggg < 2:342095/149‑1 (MQ=255) aaTCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCggg > 7:247166/1‑149 (MQ=255) aaTCATGGGTCTGTTCTTTTTCCAGCAGGTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCgg < 3:406130/148‑1 (MQ=255) aTCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGc < 3:32830/149‑1 (MQ=255) tGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCaaa < 7:405231/149‑1 (MQ=255) gTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACca > 7:323106/1‑149 (MQ=255) agTTCTTTTGCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACACCTCCTCGGCTCCCTGC‑ACGGCCGTATCACGGCGCCGCCGGACGCACACAGACCGCACCACGAAGCCACCCGCCAGCAAGATCACCGGGCCACACCCcag > 6:434032/2‑149 (MQ=255) ttCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcagca < 8:328404/149‑1 (MQ=255) ttCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcag > 6:71061/1‑147 (MQ=255) ccttttCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACagcagc > 5:266010/3‑149 (MQ=255) tttttCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGCAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACagcagc > 6:305978/1‑148 (MQ=255) ccAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGt < 3:347058/148‑1 (MQ=255) cagcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGc < 5:398838/111‑1 (MQ=255) cagcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGc > 6:398838/1‑111 (MQ=255) agcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTGCGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACcac < 5:201654/135‑1 (MQ=255) agcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTGCGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACcac > 6:201654/1‑135 (MQ=255) agcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACcac < 4:5424/135‑1 (MQ=255) gcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcag < 7:136052/136‑1 (MQ=255) gcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCAcag > 8:136052/1‑136 (MQ=255) gcagTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGc > 7:164499/1‑149 (MQ=255) gTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCg > 5:297479/1‑149 (MQ=255) tttG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACgtcaca > 2:155358/1‑144 (MQ=255) tG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCt < 2:352493/148‑1 (MQ=255) g‑gCGAGACGCTAGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTg < 8:360569/148‑1 (MQ=255) gCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGa < 7:33070/148‑1 (MQ=255) cGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAgc < 3:333755/149‑1 (MQ=255) gaCGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGcc < 5:71061/149‑1 (MQ=255) gCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGc > 1:189164/1‑149 (MQ=255) gCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGc < 3:248364/149‑1 (MQ=255) gCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGc > 4:248364/1‑149 (MQ=255) gCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGc > 7:293999/1‑149 (MQ=255) gTTCT‑TAGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATAACCGCCAGCACCACGAAGCCAACGGCCAGCAAGATACCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAg > 4:193800/1‑149 (MQ=255) t‑tcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCa > 4:133191/1‑149 (MQ=255) t‑tcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCa > 6:86786/1‑149 (MQ=255) t‑tcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCa > 4:77466/1‑149 (MQ=255) t‑tcGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCa > 7:216794/1‑149 (MQ=255) ggCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACg > 3:105765/1‑148 (MQ=255) gCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGaa < 3:133191/149‑1 (MQ=255) gCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGaa < 7:88043/149‑1 (MQ=255) cAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCCCCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAg > 3:21307/1‑149 (MQ=255) cAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGc > 2:85430/1‑149 (MQ=255) cgtacgccGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTc < 8:317521/139‑1 (MQ=38) cgtacgccGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTc > 7:317521/8‑146 (MQ=38) cTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCa > 5:423993/1‑148 (MQ=255) tCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCa > 7:305505/1‑147 (MQ=255) aTCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAg < 2:340331/148‑1 (MQ=255) aTCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAg < 1:389704/148‑1 (MQ=255) tCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCg < 5:86786/149‑1 (MQ=255) ccGGCGCCGTGCTACGGCCGT‑GCAGGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCg > 8:102598/2‑149 (MQ=255) cGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGa > 3:77493/1‑135 (MQ=255) cGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGa < 4:77493/135‑1 (MQ=255) ggCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGt > 6:207971/1‑149 (MQ=255) ggCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGAGCACGAAGTCGCCATAGCgg < 6:297479/148‑1 (MQ=255) cccTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGAc < 8:164499/149‑1 (MQ=255) aCGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATg > 5:332565/1‑147 (MQ=255) aCGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATGaa < 6:266010/149‑1 (MQ=255) aCGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATGaa < 8:216794/149‑1 (MQ=255) ggCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATGAAGt < 8:323106/149‑1 (MQ=255) ggCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATGAAGt > 7:362510/1‑149 (MQ=255) gTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATGAAGTCgat < 8:362510/149‑1 (MQ=255) | GATCGGGAGCAGCAAAAAGCTGAGGGCAGCGAGCAGCAGAAGGCCCGCGCTAAGCCAGAATTCAATCATGGGTCTGTTCTTTTTCCAGCAGTTTG‑GCGAGACGCTCGCGTTCT‑TCGGCAGACAACTCATCGGCGCCCTGC‑ACGGCCGTAGCACGGCGCCGGCGTACGATCACCGCCAGCACCACGAAGCCACCGGCCAGCAAGATCCCCGGGCCAAACCACAGCAGCCAGGTACGCCCGCTGAGCGCCGGCTTGTAGCGCACGAAGTCGCCATAGCGGTCGACCATGAAGTCGAT > NC_002947/4911643‑4911937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |