| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,479,939:1 | +G | 6.4% | coding (463/993 nt) | prmA → | ribosomal protein L11 methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,479,939 | 1 | . | G | 6.4% | 373.0 / 17.9 | 94 | coding (463/993 nt) | prmA | ribosomal protein L11 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (48/40); new base G (3/3); total (51/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.83e-01 | |||||||||||
TTCGCCCACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACTTTGGCTG > NC_002947/5479798‑5480087 | ttCGCCCACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGa > 4:91879/1‑149 (MQ=255)ttCGCCCACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTG‑CCAGCTGGGCACGa < 8:364442/149‑1 (MQ=255) cGCCCACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATg > 4:191986/1‑149 (MQ=255) cGCCCACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATg > 6:63011/1‑149 (MQ=255) gCCCACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTG‑CCAGCTGGGCACGAtcc < 3:127988/149‑3 (MQ=255) cccACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTG‑CCAGCTGGGCACGAtcca < 6:184282/149‑4 (MQ=255) ccACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCATGATGccc > 7:69572/1‑149 (MQ=255) cgcCTGCTTACCGGCGCCGAGCTGCCCGATCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGaaaa < 7:355906/149‑1 (MQ=255) cgcCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGaaaa < 2:393581/149‑1 (MQ=255) gcCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAg < 1:362812/149‑1 (MQ=255) ctgctgACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAgg < 8:275628/148‑1 (MQ=255) ctgctgACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAgg > 7:275628/1‑148 (MQ=255) gctgACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAACAGGACg > 4:236457/1‑149 (MQ=255) gctgACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACg > 2:219915/1‑149 (MQ=255) ctgACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGc > 3:19428/1‑149 (MQ=255) tgACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGcc > 6:195815/1‑149 (MQ=255) tgACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGcc > 8:37018/1‑149 (MQ=255) gACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCg > 7:230626/1‑149 (MQ=255) cGAGCTGCCCGAGCACCAGGCCGACGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACctgc > 5:133405/1‑149 (MQ=255) aGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACctgctg < 1:219915/149‑1 (MQ=255) cTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTgctgct > 6:399310/1‑149 (MQ=255) cccGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGa > 7:185608/1‑149 (MQ=255) gCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCgg < 5:399310/149‑1 (MQ=255) aCCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGggc < 7:404860/149‑1 (MQ=255) aCCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGggc > 2:419942/1‑149 (MQ=255) ccAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGggcc > 8:29517/1‑149 (MQ=255) ggCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGggcctgg < 7:17904/149‑1 (MQ=255) cGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGggcctggcct > 7:341790/1‑149 (MQ=255) aGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGCCCCTGCTGCTAGACCCGGGCCTGGCCttt > 3:63215/1‑149 (MQ=255) ggTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTg < 6:105399/149‑1 (MQ=255) ggTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTg < 6:411519/149‑1 (MQ=255) gTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTgg > 4:205616/1‑149 (MQ=255) cGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCg > 3:308376/1‑149 (MQ=255) gAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCgg > 6:147166/1‑149 (MQ=255) gAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCgg < 7:37018/149‑1 (MQ=255) gAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCgg < 2:25423/149‑1 (MQ=255) aGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCgg > 1:167364/1‑148 (MQ=255) aGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCgg > 7:291277/1‑148 (MQ=255) ccAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACt > 6:55021/1‑148 (MQ=255) cAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGTGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCa > 6:292841/1‑149 (MQ=255) cAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGACCCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCa > 8:118994/1‑149 (MQ=255) ggACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGCATTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGggcctggc > 1:84045/1‑130 (MQ=255) ggACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGggcctggc < 2:84045/129‑1 (MQ=255) cTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCcca > 6:15790/1‑149 (MQ=255) gAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACt < 3:38497/138‑1 (MQ=255) gAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACt > 4:38497/1‑138 (MQ=255) aaCGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACg > 8:312672/1‑149 (MQ=255) aCGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACgg < 7:219056/149‑1 (MQ=255) cGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGc < 8:185608/149‑1 (MQ=255) gCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGcc < 6:166872/149‑1 (MQ=255) gCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGTCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCttt > 5:189414/1‑119 (MQ=255) gCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGTCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCttt < 6:189414/119‑1 (MQ=255) cTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCtgt > 3:390441/1‑149 (MQ=255) atggaCAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCt < 3:205616/149‑1 (MQ=255) tggaCAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTg < 8:341790/149‑1 (MQ=255) tggaCAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTg > 1:327395/1‑149 (MQ=255) ggaCAACTTCCAGCGGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTg > 7:368491/1‑148 (MQ=255) aCAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGaa > 6:275816/1‑149 (MQ=255) aCAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGaa < 6:387128/149‑1 (MQ=255) aCAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGaa > 4:208782/1‑149 (MQ=255) aCAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGaa > 8:361547/1‑149 (MQ=255) aCTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATgg < 4:276313/149‑1 (MQ=255) aCTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATgg < 3:163174/149‑1 (MQ=255) cTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGc > 1:8819/1‑149 (MQ=255) cTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGc < 5:195815/149‑1 (MQ=255) ccAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCt < 8:291277/147‑1 (MQ=255) ccAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTc > 5:259868/1‑148 (MQ=255) cAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGAAGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGCCCTATGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTCGAATGGCTCGa > 1:317510/1‑149 (MQ=255) cAGCCGATGCGC‑GTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGa > 3:388822/1‑149 (MQ=255) aGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGAc < 8:230626/149‑1 (MQ=255) gCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACg < 6:259868/149‑1 (MQ=255) gCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACg < 3:199892/149‑1 (MQ=255) gATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGcc < 3:91879/149‑1 (MQ=255) gATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGcc < 7:312672/149‑1 (MQ=255) tgc‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGAGGGCcagc < 5:292841/147‑1 (MQ=255) cgc‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCGCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCcagc < 2:167364/148‑1 (MQ=255) cgc‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCcagca < 8:368491/149‑1 (MQ=255) gc‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCcagcag > 2:26668/1‑149 (MQ=255) gc‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCcagcag > 7:50081/1‑149 (MQ=255) c‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCagcagc < 5:55021/149‑1 (MQ=255) ggCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTg < 5:147166/148‑1 (MQ=255) gccgccgccTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGaa < 4:388822/149‑1 (MQ=255) gccgccgccTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGaa < 3:208782/149‑1 (MQ=255) ccgccgccTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAg > 4:58541/1‑149 (MQ=255) cgccgccTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAgg > 8:392803/1‑149 (MQ=255) ggcaTCGTG‑CCAGCTGGGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGCCCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGt > 2:406119/4‑149 (MQ=255) gcaTCGTG‑CCAGCTGGGCACGAT‑CCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGc > 7:316534/3‑149 (MQ=255) tCGTG‑CCAGCTGGGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTg > 1:224193/1‑149 (MQ=255) ccAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCCGGTGCTGGACttt > 8:274691/1‑149 (MQ=255) ccAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACttt < 5:98242/149‑1 (MQ=255) ccAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACttt > 4:317326/1‑149 (MQ=255) ccAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACttt > 1:387894/1‑149 (MQ=255) aGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACTTTgg < 7:361547/149‑1 (MQ=255) gCT‑GGCATGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACTTTGGc < 8:69572/149‑1 (MQ=255) t‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACTTTGGCTg > 4:230064/1‑149 (MQ=255) | TTCGCCCACCTGCGCCTGCTGACCGGCGCCGAGCTGCCCGAGCACCAGGCCGAGGTGATCGAGGACCAGGACTGGGAACGCAGCTGGATGGACAACTTCCAGCCGATGCGC‑TTCGGCCGCCGCCTGTGGATCGTGCCCAGCT‑GGCACGATGCCCCGGAAAAGGACGCCGTGAACCTGCTGCTCGACCCGGGCCTGGCCTTTGGCACCGGCACTCACCCCACCACGGCCCTGTGCCTGGAATGGCTCGACGGCCAGCAGCTTGAAGGCACCCAGGTGCTGGACTTTGGCTG > NC_002947/5479798‑5480087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |