| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,344,688:1 | +C | 5.5% | intergenic (‑39/+36) | PP_2061 ← / ← PP_2062 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,344,688 | 1 | . | C | 5.5% | 293.2 / 8.9 | 72 | intergenic (‑39/+36) | PP_2061/PP_2062 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (38/30); new base C (2/2); total (40/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
AGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTG > NC_002947/2344541‑2344835 | aGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGt‑t > 4:420679/1‑149 (MQ=255) tcgtcgACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑Ttc < 5:334452/149‑1 (MQ=255) gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑Ttcgtcg < 5:438561/148‑1 (MQ=255) aataaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCtt > 4:367660/1‑149 (MQ=255) aataaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCt > 4:29853/1‑148 (MQ=255) aataaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCt > 3:172998/1‑148 (MQ=255) ataaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCtt > 5:389557/1‑148 (MQ=255) ataaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTc < 6:214476/149‑1 (MQ=255) taaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCa > 8:110300/1‑149 (MQ=255) aaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCACCTTCAt > 8:375632/1‑149 (MQ=255) ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATg < 3:367660/149‑1 (MQ=255) cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt > 3:165483/1‑147 (MQ=255) cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGa < 7:172032/149‑1 (MQ=255) cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGa < 7:79633/149‑1 (MQ=255) ccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAg > 5:209059/1‑149 (MQ=255) tcATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTa > 6:196005/1‑149 (MQ=255) tAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAttt > 4:128147/1‑149 (MQ=255) tAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAttt < 6:237955/149‑1 (MQ=255) aGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTg > 2:34422/1‑149 (MQ=255) gCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGt > 4:357599/1‑148 (MQ=255) gCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTa < 1:34422/149‑1 (MQ=255) taACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACCACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCa < 7:110300/148‑1 (MQ=255) aaCCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGt > 7:321495/1‑149 (MQ=255) aCCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCGGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGt > 1:108025/1‑148 (MQ=255) aCCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGt > 2:70615/1‑148 (MQ=255) aCCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGt < 4:172998/148‑1 (MQ=255) aCCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTg < 3:420679/149‑1 (MQ=255) cAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATggg < 2:363988/149‑1 (MQ=255) gcTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGa > 5:2950/1‑149 (MQ=255) gcTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGa > 5:9019/1‑149 (MQ=255) gcTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGa > 4:184825/1‑149 (MQ=255) ttATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAttttttt < 6:209059/149‑1 (MQ=255) ttGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgcg < 3:357599/149‑1 (MQ=255) tGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAt > 1:418376/1‑149 (MQ=255) gCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAtt < 1:70615/148‑1 (MQ=255) aTTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAttgtt > 1:335696/1‑149 (MQ=255) tCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGtt > 1:102428/1‑148 (MQ=255) ccAGATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTCGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGa < 4:253637/148‑1 (MQ=255) acaTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGataa > 8:236654/1‑149 (MQ=255) cAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTg < 2:418376/148‑1 (MQ=255) aGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGAt < 5:378467/149‑1 (MQ=255) aGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGAt > 5:404973/1‑149 (MQ=255) gcTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc < 6:40858/128‑1 (MQ=255) gcTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc > 5:40858/1‑128 (MQ=255) gCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATg > 6:184730/1‑149 (MQ=255) cGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGc < 3:184825/149‑1 (MQ=255) gTGAGTATTCAAGTGGGCGTCAGTAGA‑GGCGCCGAAGACGACCTGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc < 5:424601/149‑1 (MQ=255) gTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGc > 7:310164/1‑148 (MQ=255) tGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTAATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATATTATTGATGTCTACGATTccc > 5:353985/1‑149 (MQ=255) tATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc < 5:184730/149‑1 (MQ=255) tCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTta > 2:115443/1‑149 (MQ=255) aaGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtat > 3:227238/1‑148 (MQ=255) aaGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCACCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtat < 7:375632/148‑1 (MQ=255) agagGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATaa < 3:29853/149‑1 (MQ=255) gagGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtata > 1:193080/1‑147 (MQ=255) gCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCtt < 4:165483/149‑1 (MQ=255) gTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCtttt > 1:106979/1‑149 (MQ=255) gTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCtttt < 2:106979/149‑1 (MQ=255) gTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTGGTGGCCTTCATTTATGAGTGTGTATTTTTAAATAAGTGATGGGCAGATTTTTTTGGGCTTTTGTTGTGGTTGATAATATTGATGTCTACGATTCCCTTGATTATAAAGCttattgc > 6:293912/1‑143 (MQ=255) tgaa‑gGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCAt > 6:420743/4‑149 (MQ=38) tAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCAt > 7:180528/1‑149 (MQ=255) cgacgaaacgacCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt > 2:344698/8‑147 (MQ=255) aaGACGACCAGGGTCGT‑TTCGTCGACAACATTTATGAGTGTGTATTTGTAAATCAGTGATGCGATGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTAATAAAGCTTTTGGCATCATTGAGTTCg > 8:187130/1‑149 (MQ=255) acgacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGtt < 2:108025/149‑1 (MQ=255) acgacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGtt > 2:148111/1‑149 (MQ=255) cgacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGtt < 6:389557/148‑1 (MQ=255) gacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGttt > 6:253050/1‑148 (MQ=255) ccctggTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTa < 1:344698/145‑1 (MQ=255) cctggTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTaa < 5:420743/146‑1 (MQ=255) cAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGATTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAg < 6:9019/149‑1 (MQ=255) cAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGATTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAg < 6:2950/149‑1 (MQ=255) tCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGtt > 4:180601/1‑149 (MQ=255) gT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTg > 2:102538/1‑149 (MQ=255) | AGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGA‑GGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTG > NC_002947/2344541‑2344835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |