| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 44783 | 66 (0.920) | 5 (0.070) | 5/258 | NT | 7.4% | coding (742/1998 nt) | cadA‑I | cadmium translocating P‑type ATPase |
| ? | NC_002947 | = 44808 | 61 (0.880) | coding (717/1998 nt) | cadA‑I | cadmium translocating P‑type ATPase | |||||
TCACGGAACGGCTCGTCAAGGAAAATGCCGGCAAATAGCAGCCCGACTACCAGCAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/44632‑44783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGATGGTCAGTGAAGCCGAAGTCAGGAAGTCACCGACCCAGCGATTCACGGACCGCTTCCAACGCATATTCGTCCCGTTGGTTTTACTGCTGGTAGTCGGGCTGCTATTTGCC < NC_002947/44808‑44661 TCACGGAACGGCTCGTCAAGGAAAATGCCGGCAAATAGCAGCCCGACTACCAGCAGAAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGAC < 4:282941/149‑1 GGAAAATGCCGGCAAATAGCAGCCCGACTACCAGCAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGACCCGGCGCTCTACGGAGAG > 3:302116/1‑148 GCAAATAGCAGCCCGACTACCAGCAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGACCCGGCGCTCTACGGAGAGTACCTTGGCGCG > 5:255351/1‑149 TAGAAGACCGACTACCAGCATTAAAACCAACGGGACTAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGACCCGGCGCTCTACGGAGAGTACCTTGGCGCGGGTCA < 4:302116/149‑1 CCCGACTACCAGCAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGACCCGGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGA < 5:235361/149‑1 CGACTACCAGCAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGA < 7:400781/105‑1 CGACTACCAGCAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGA > 8:400781/1‑105 CAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGACCCGGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGATGGTCAGTGAAG < 6:255351/149‑1 CCGGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGATGGTCAGTGAAGCCGAAGTCAGGAAGTCACCGACCCAGCGATTCACGGACCGCTTCCAACGCATATTCGTCCCGTTGGTTTTACTGCTGGTAGTCGGGCTGCTATTTG > 4:384514/1‑149 CGGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGATGGTCAGTGAAGCCGAAGTCAGGAAGTCACCGACCCAGCGATTCACGGACCGCTTCCAACGCATATTCGTCCCGTTGGTTTTACTGCTGGTAGTCGGGCTGCTATTTGC < 2:10621/149‑1 GGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGATGGTCAGTGAAGCCGAAGTCAGGAAGTCACCGACCCAGCGATTCACGGACAGCTTCCAACGCATATTCGTCCCGTTGGTTTTACTGCTGGTAGTCGGGCTGCTATTTGCC > 1:282957/1‑149 TCACGGAACGGCTCGTCAAGGAAAATGCCGGCAAATAGCAGCCCGACTACCAGCAGTAAAACCAACGGGACGAATATGCGTTGGAAGCGGTCCGTGAATCGCTGGGTCGGTGACTTCCTGACTTCGGCTTCACTGACCATCTTGATGACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/44632‑44783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgGCGCTCTACGGAGAGTACCTTGGCGCGGGTCATCAAGATGGTCAGTGAAGCCGAAGTCAGGAAGTCACCGACCCAGCGATTCACGGACCGCTTCCAACGCATATTCGTCCCGTTGGTTTTACTGCTGGTAGTCGGGCTGCTATTTGCC < NC_002947/44808‑44661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |