| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 85506 = | 63 (0.880) | 4 (0.060) | 4/256 | NT | 6.3% | coding (1212/1566 nt) | PP_0075 | choline sulfate transporter |
| ? | NC_002947 | 85558 = | 59 (0.860) | coding (1160/1566 nt) | PP_0075 | choline sulfate transporter | |||||
ATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTG‑CAGACAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/85658‑85506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatcACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCACGGCGAACAACG > NC_002947/85558‑85702 ATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTG‑CAGACAGC < 7:245036/149‑1 GTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTG‑CAGACAGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGG > 2:7425/1‑149 GATGGCGCTGACGGCTGCAGCGTCATTGCTGCTGGAGCTG‑CAGACAGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCG > 1:208026/1‑149 ACGGCTGCAGCGACATTGCTGCTGGAGCTG‑CAGACAGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGC < 1:7425/147‑1 GGCTGCAGCGACATTGCTGCTGGAGCCGTCAG‑C‑GCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTG > 7:169703/1‑149 AGACAGCCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCACGGCG < 2:208026/149‑1 CCATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCACGGCGAACAAC < 8:245036/149‑1 CATCACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCCCCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCACGGCGAACAACG > 6:421969/1‑149 ATACCGGCCATGGCCGGCAGCATTCTGCTGATCTGCTGGGGGTTGGTGGACCACCGAGGGATCCGTGCATTGTTCCGGGTCAGCCGCTCGGAGTTTCTGGTGATGGCGCTGACGGCTGCAGCGACATTGCTGCTGGAGCTG‑CAGACAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/85658‑85506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatcACCAGAAACTCCGAGCGGCTGACCCGGAACAATGCACGGATCCCTCGGTGGTCCACCAACCCCCAGCAGATCAGCAGAATGCTGCCGGCCATGGCCGGTATCGGCAGGTGCGCGATCAGGCCGGCGCCGGTCACGGCGAACAACG > NC_002947/85558‑85702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |