New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 90953681 (1.130)5 (0.080) 5/248 NT 6.3% coding (44/2853 nt) fruB PTS fructose transporter subunit EI/HPr/IIA
?NC_002947 = 909559 74 (1.120)coding (67/2853 nt) fruB PTS fructose transporter subunit EI/HPr/IIA

CTGCCGAATTTTCTGCCTCGGCTGCCACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/909379‑909536
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagaaggcGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGACCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCACATAAAGGGCCAGTTCAGCAAC  <  NC_002947/909559‑909416
                                                                                                                                                                                                                                                                                                              
CTGCCGAATTTTCTGCCTCGGCTGCAACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTAGAGCTCGCCAATGAGCAGATAGCCATGGG                                                                                                                                                           >  4:65318/1‑149
  GCCGAATTTTCTGCCTCGGCTGCCACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGC                                                                                                                                                          >  3:313999/1‑148
     GAATTTTCTGCCTCGGCTGCCACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAG                                                                                                                                                       >  4:400616/1‑148
      AATTTTCTGCCTCGGCTGCCACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAG                                                                                                                                                       >  3:163900/1‑147
        TTTTCTGCCTCGGCTGCCACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGAAGG                                                                                                                                                   <  7:132601/149‑1
               CCTCGGCTGCCACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGA                                                                                                                                                      <  2:153313/139‑1
                                         CTGAACTGGGCGTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAATTGGAGAAGGTCATGCTCGAACTCGCCAATGAGCAGATAGCCATGGGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGG                                                                                                                  <  4:104813/149‑1
                                         CTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTTCTG                                                                                                                   <  2:322258/148‑1
                                            AACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAATGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGC                                                                                                                 <  1:406913/147‑1
                                                                   ACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTT                                                                                                                      <  5:170820/119‑1
                                                                   ACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTT                                                                                                                      >  6:170820/1‑119
                                                                                                                                                    GCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGGCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGATCGAGCATGAACTTCTCCTTTTGCAGTTCCCGTTGGTGTACTGGAGAATGGTTGTGAAATTCTGATTAAGGGCCTGTT         >  8:279778/1‑147
                                                                                                                                                    GCCAGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGCCCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCACATAAAGGGCCAGTT         >  5:431181/1‑147
                                                                                                                                                       AGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGACCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCACATAAAGGGCCAGTTCAGC     >  5:354046/1‑148
                                                                                                                                                       AGAAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGACCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCACATAAAGGGCCAGTTCAGC     >  6:379911/1‑148
                                                                                                                                                         AAGGCGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGACCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCACATAAAGGGCCAGTTCAGCAAC  >  4:243786/1‑149
                                                                                                                                                             CGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGACCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCA                        <  7:74798/123‑1
                                                                                                                                                             CGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGACCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCA                        >  8:74798/1‑123
                                                                                                                                                                                                                                                                                                              
CTGCCGAATTTTCTGCCTCGGCTGCCACCCGCGCAAGGTTGCTGAACTGGCCCTTTATGTGAATTTCACAACAATACTCCAGTACCCGAACGGGAACTGCAAAAGGAGAAGGTCATGCTCGAGCTCGCCAATGAGCAGATAGCCATGGGCCAGAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/909379‑909536
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagaaggcGTAACGCCTCGGCCTTGTCGGCGGCCTTCTGGCCCATGGCTATCTGCTCATTGGCGAGCTCGAGCATGACCTTCTCCTTTTGCAGTTCCCGTTCGGGTACTGGAGTATTGTTGTGAAATTCACATAAAGGGCCAGTTCAGCAAC  <  NC_002947/909559‑909416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.