| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1005210 = | 95 (1.330) | 5 (0.080) | 4/248 | NT | 5.2% | coding (140/2430 nt) | PP_0867 | FecA‑like outer membrane receptor |
| ? | NC_002947 | 1005262 = | 94 (1.420) | coding (192/2430 nt) | PP_0867 | FecA‑like outer membrane receptor | |||||
TGTCCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1005365‑1005210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagctggtCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCAGC > NC_002947/1005262‑1005409 TGTCCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCG < 5:57746/149‑1 TCCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAG > 3:15605/1‑149 CCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGC < 6:284047/149‑1 CCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCT > 7:113542/1‑149 CCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCT > 6:67377/1‑149 CGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGG < 8:194060/149‑1 CGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGG > 5:271014/1‑149 CGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGG < 1:174753/149‑1 CGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGG < 6:236316/149‑1 CCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCG > 4:68328/1‑149 CCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCG > 5:130932/1‑149 CAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGG > 5:163361/1‑149 AGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGG < 3:68328/149‑1 CTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGA < 6:163361/149‑1 CCGAGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGAC < 5:284047/149‑1 AGCTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTG < 5:43925/149‑1 CTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGG < 4:344141/149‑1 CTGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGG < 2:55697/149‑1 TGGTCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGG > 6:199430/1‑148 TCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCAGC > 6:377678/1‑149 TGTCCCCGGTCATCTCGAAGGTGAGCCCGCTGCCTTGCAACAGCTGTTGCAGCGCCTGCACCGGCGCGAGGTTGCCCGATACCGCCGGGGCCTGTTTGCCGGCGACCAGCTCGGGACTGAAAAACAGCTGCAGGCTGGTCTGCTGGCCGAGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1005365‑1005210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagctggtCGCCGGCAAACAGGCCCCGGCGGTATCGGGCAACCTCGCGCCGGTGCAGGCGCTGCAACAGCTGTTGCAAGGCAGCGGGCTCACCTTCGAGATGACCGGGGACACCGTTGTGGTGAAGCCTCTGCCGACTACCCTTGACCTGGGCAGC > NC_002947/1005262‑1005409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |