| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1062756 | 74 (1.030) | 8 (0.120) | 5/248 | NT | 10.4% | intergenic (+26/+83) | PP_0919/xenB | hypothetical protein/xenobiotic reductase B |
| ? | NC_002947 | = 1062818 | 70 (1.060) | intergenic (+88/+21) | PP_0919/xenB | hypothetical protein/xenobiotic reductase B | |||||
CGGCTGCGGCGTCATCCAGTGGTGCTTCGGTGCAGGAGTTCGATGCCTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1062600‑1062756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGCGTATTCA < NC_002947/1062818‑1062672 CGGCTGCGGCGTCATCCAGTGGTGCTTCGGTGCAGGAGTTCGATGCCTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTT < 3:123274/149‑1 CGGCGTCATCCAGTGGTGCTTCGGTGCAGGAGTTCGATGCCTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGG < 5:78748/148‑1 GCGTCATCCAGTGGTGCTTCGGTGCAGGAGTTCGATGCCTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGTCA > 8:24025/1‑149 CGGTGCAGGAGTTCGATGCCTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCATGCCCGCTCCCACCGGTA > 6:309934/1‑148 CTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCGTGCCCGCgaac > 4:26092/1‑118 CTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCGTGCCCGCgaac > 4:20305/1‑118 CTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCGTGCCCGCgaac < 3:26092/122‑5 CTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCGTGCCCGCgaac < 3:20305/122‑5 GATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTG > 4:420547/1‑149 GTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCG < 3:420547/149‑1 TAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGG < 5:309934/149‑1 TTCGCGGGCATGCCCGCTCCCTCCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAG < 6:336466/149‑1 TTCGCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTATGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAG < 1:181820/149‑1 CGCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGC < 3:55167/148‑1 CGCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGC < 6:216452/148‑1 GCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGCG > 3:117250/1‑148 GCGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTCTTGCTGCAGGTTCTGAATCTGGCTCTGCAGCG > 3:249622/1‑148 CGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGCGTA < 8:146576/149‑1 CGGGCATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGCGTA > 1:382862/1‑149 CATGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGCGTATTCA < 8:216798/149‑1 CGGCTGCGGCGTCATCCAGTGGTGCTTCGGTGCAGGAGTTCGATGCCTTCCGTGCGCAGATGACGCGTAATCTGAATACGCTGCAGAGCCAGATTCAGAACCTGCAGCAACAGATCAACGCCCGTCCGTAACATCAGCTGAGCCTTGTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1062600‑1062756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACCGGTATAGCGACAGGCTTGAAGCTGCGCTCGATCCTGTGGAAGCGGGCGTGCCCGCGAACAAGGCTCAGCTGATGTTACGGACGGGCGTTGATCTGTTGCTGCAGGTTCTGAATCTGGCTCTGCAGCGTATTCA < NC_002947/1062818‑1062672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |