New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1237854 = | 81 (1.130) | 6 (0.090) | 6/260 | NT | 7.8% | coding (255/1110 nt) | PP_1078 | ABC transporter ATP‑binding protein |
? | NC_002947 | 1237914 = | 64 (0.920) | coding (195/1110 nt) | PP_1078 | ABC transporter ATP‑binding protein |
TTGCCTGCTGGGTTCATCCGGTTGTGGCAAGACCACCACCCTGCGCGCCATCGCCGGTTTCGAGCCGGTGCACGAAGGTGAAATCCACCTGGCCGGTGAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1238004‑1237854 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAGCAGGCAACCGATGTCGCCTGCGTTCAGGTGCAGGTTGAGGTTCTGGACGATGCGCTGGTCGCCA > NC_002947/1237914‑1238061 TTGCCTGCTGGGTTCATCCGGTTGTGGCAAGACCACCACCCTGCGCGCCATCGCCGGTTTCGAGCCGGTGCACGAAGGTGAAATCCACCTGGCCGGTGAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCG > 2:131390/1‑149 ACCTGGCCGGTGAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAG > 3:108488/1‑149 CCTGGCCGGTGAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGC < 1:148098/129‑1 CCTGGCCGGTGAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGC > 2:148098/1‑129 CTGGCCGGTGAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAG > 3:289098/1‑147 GAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAGCAGGCAACCGA < 4:108488/149‑1 GGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAGCAGGCAACCGATGTCGCCTGCGTTC < 4:289098/149‑1 GGCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAGCAGGCAACCGATGTCGCCTGCGTTCAGGTGCAGGTTGAGGTTCTGGACGATGCGCTGGTCGC < 5:168390/149‑1 GCCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAGCAGGCAACCGATGTCGCCTGCGTTCAGGTGCAGGTTGAGGTTCTGGACGATGCGCTGGTCGCC < 7:345342/149‑1 CCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAGCAGGCAACCGATGTCGCCTGCGTTCAGGTGCAGGTTGAGGTTCTGGACGATGCGCTGGTCGCCA > 2:344614/1‑149 TTGCCTGCTGGGTTCATCCGGTTGTGGCAAGACCACCACCCTGCGCGCCATCGCCGGTTTCGAGCCGGTGCACGAAGGTGAAATCCACCTGGCCGGTGAGGTCATTTCCCGGGCTGGCTTCACCCTGGCCCCGGAAAAGCGCCGCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1238004‑1237854 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcCAGGTGGATTTCACCTTCGTGCACCGGCTCGAAACCGGCGATGGCGCGCAGGGTGGTGGTCTTGCCACAACCGGATGAACCCAGCAGGCAACCGATGTCGCCTGCGTTCAGGTGCAGGTTGAGGTTCTGGACGATGCGCTGGTCGCCA > NC_002947/1237914‑1238061 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |