| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1267789 = | 76 (1.060) | 5 (0.070) | 5/258 | NT | 6.2% | coding (199/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP |
| ? | NC_002947 | 1267831 = | 78 (1.130) | coding (157/2442 nt) | quiP | acyl‑homoserine lactone acylase QuiP | |||||
CACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1267937‑1267789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaaCATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCAGCCCGAGCATGCCGAGCAGGGTGGCAGCGGTTGCGAACCGCAGGCGGAAGGGAGGAAAGGC > NC_002947/1267831‑1267975 CACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTTCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA < 4:170230/149‑1 CTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA > 5:121200/1‑145 CTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA < 6:121200/145‑1 AGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCAGCCCGAGCATGCCGAG > 1:181039/1‑148 AATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCA < 1:220588/130‑1 AATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCA > 2:220588/1‑130 TGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCAGCCCGAGCATGCCGAGCAGGG > 7:137714/1‑149 AATGCCATGGGCGCGCCGCTGATCGAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCAGCCCGAGCATGCCGAGCAGGGTGGCAGCGGTTGCGAA < 2:181039/149‑1 GAAACATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCAGCCCGAGCATGCCGAGCAGGGTGGCAGCGGTTGCGAACCGCAGGCGGAAGGGAGGAAAGGC > 4:247708/1‑149 CACCCTGCTCGGCATGCTCGGGCTGGCCGGCTGCCAGACGGGCGGCTATCAGGACAGCGTGCCACCGACCAGCGGCGTGCAGCCGCTCAAAGGCCTGGCACAGAATGTTTCGGTACGGCGCAATGCCATGGGCGCGCCGCTGATCGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1267937‑1267789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaaCATTCTGTGCCAGGCCTTTGAGCGGCTGCACGCCGCTGGTCGGTGGCACGCTGTCCTGATAGCCGCCCGTCTGGCAGCCGGCCAGCCCGAGCATGCCGAGCAGGGTGGCAGCGGTTGCGAACCGCAGGCGGAAGGGAGGAAAGGC > NC_002947/1267831‑1267975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |