| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1375310 | 66 (0.920) | 5 (0.070) | 5/260 | NT | 6.9% | coding (930/1911 nt) | kup | potassium transport system protein Kup |
| ? | NC_002947 | = 1375342 | 71 (1.020) | coding (962/1911 nt) | kup | potassium transport system protein Kup | |||||
CTGGTTCATCCTGGTGCTCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1375160‑1375310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT < NC_002947/1375342‑1375195 CTGGTTCATCCTGGTGCTCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGG > 2:420851/1‑149 TCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCC > 8:355527/1‑149 TTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCAT < 7:355527/149‑1 CGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATG < 3:420317/148‑1 CAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGG > 5:96277/1‑121 CAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGG < 6:96277/121‑1 GGCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGT < 5:52965/149‑1 GCCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTA < 8:401268/149‑1 CCCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAA < 3:325861/149‑1 CCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT > 3:267810/1‑149 CCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT > 6:103606/1‑149 CTGGTTCATCCTGGTGCTCCCGGCGCTGGTGCTCAATTACTTCGGCCAGGGTGCATTGCTGCTGCAAAACCCGGAGGCCGCGCGCAATCCGTTCTATCTGCTGGCGCCGGGCTGGGCGCTGCTGCCGTTGGTCGGGCTGGCCACCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1375160‑1375310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCCGGAAATCACCGCCTGCGAGGCGATAACCGTGGCCATGGTGGCCAGCCCGACCAACGGCAGCAGCGCCCAGCCCGGCGCCAGCAGATAGAACGGATTGCGCGCGGCCTCCGGGTTTTGCAGCAGCAATGCACCCTGGCCGAAGTAAT < NC_002947/1375342‑1375195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |