New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1567580 | 60 (0.840) | 4 (0.060) | 4/254 | NT | 6.4% | coding (64/1347 nt) | pcaK | 4‑hydroxybenzoate transporter |
? | NC_002947 | = 1567608 | 60 (0.880) | coding (92/1347 nt) | pcaK | 4‑hydroxybenzoate transporter |
ACCCAGGCCATATACCCCAATCATCGCCCTTGTACCGGATGCCCGCGTGCAATGGCCTGACTGTGCCCCACATTCTGGATAACAATAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1567430‑1567580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcACGACCCGCCACTGATAGCGGGACAGCGGCTGCTGATTGATGAATGACTGAACGTCGAGGCTTTTGCCGACGTTGGTTTGCGCTTGGTTCATTATTGTTATCCAGAATGTGGGGCACAGTCAGGCCATTGCACGCGGGCATCCGGT < NC_002947/1567608‑1567463 ACCCAGGCCATATACCCCAATCATCGCCCTTGTACCGGATGCCCGCGTGCAATGGCCTGACTGTGCCCCACATTCTGGATAACAATAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAG < 2:187446/147‑1 CCCAGGCCATATACCCCAATCATCGCCCTTGTACCGGATGCCCGCGTGCAATGGCCTGACTGTGCCCCACATTCTGGATAACAATAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAGCAG > 6:354454/1‑149 GCCCTTGTACCGGATGCCCGCGTGCAATGGCCTGACTGTGCCCCACATTCTGGATAACAAAAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAGCAGCACGACCCGCCACTGATAGCGGGA > 7:245641/1‑149 TGCCCGCGTGCAATGGCCTGACTGTGCCCCACATTCTGGATAACAATAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAGCAGCACGACCCGCCACTGATAGCGGGACAGCGGCTGCTGAT < 8:245641/149‑1 AATGGCCTGACTGTGCCCCACATTCTGGATAACAATAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAGCAGCACGACCCGCCACTGATAGCGGGACAGCGGCTGCTGA > 7:163277/1‑137 AATGGCCTGACTGTGCCCCACATTCTGGATAACAATAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAGCAGCACGACCCGCCACTGATAGCGGGACAGCGGCTGCTGA < 8:163277/137‑1 GCACGACCCGCCACTGATAGCGGGACAGCGGCTGCTGATTGATGAATGACTGAACGTCGAGGCTTTTGCCGACGTTGGTTTGCGCTTGGTTCATTATTGTTATCCAGAATGTGGGGCACAGTCAGGCCATTGCACGCGGGCATCCGGT > 8:137691/1‑148 ACCCAGGCCATATACCCCAATCATCGCCCTTGTACCGGATGCCCGCGTGCAATGGCCTGACTGTGCCCCACATTCTGGATAACAATAATGAACCAAGCGCAAACCAACGTCGGCAAAAGCCTCGACGTTCAGTCATTCATCAATCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1567430‑1567580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcACGACCCGCCACTGATAGCGGGACAGCGGCTGCTGATTGATGAATGACTGAACGTCGAGGCTTTTGCCGACGTTGGTTTGCGCTTGGTTCATTATTGTTATCCAGAATGTGGGGCACAGTCAGGCCATTGCACGCGGGCATCCGGT < NC_002947/1567608‑1567463 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |