New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1800382	90 (1.260)	5 (0.070)	4/254	NT	5.7%	coding (366/3525 nt)	dnaEA	DNA polymerase III subunit alpha
	?	NC_002947	= 1800446	79 (1.160)					coding (430/3525 nt)	dnaEA	DNA polymerase III subunit alpha

GCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1800230‑1800382 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccccgCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGATCAGTTCGGTGAGGT  <  NC_002947/1800446‑1800300                                                                                                                                                                                                                                                                                                              GCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATC                                                                                                                                                           <  5:357627/147‑1                                       CTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCC                                                                                                                   >  3:306485/1‑149                                                        CCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAAT                                                                                                    >  8:240717/1‑147                                                                         CTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGG                                                                                 <  5:24419/149‑1                                                                          TCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGG                                                                                <  4:306485/149‑1                                                                            ACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGG                                                                                <  6:59574/147‑1                                                                                                                                                   CGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCTGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGATCAGTTCGGT       <  3:173185/149‑1                                                                                                                                                   CGCCCCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGATCAGTTCGGT       <  2:361259/149‑1                                                                                                                                                       CCGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGATCAGTTCGGTGAGG   <  6:101342/149‑1                                                                                                                                                        CGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGATCAGTTCGGTGAGGT  >  7:113944/1‑149                                                                                                                                                        CGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGAT                >  1:344793/1‑135                                                                                                                                                        CGCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGAT                <  2:344793/135‑1                                                                                                                                                                                                                                                                                                              GCCGGTGCCGACCCGGAAGCCCCGCTGTCGCGCATCTGCTTCCTGGCCATGGACCCCAAGGGCTATCGCAACCTCACCGAACTGATCTCGCGCGGCTGGACCGATGGCCAGCGCAATGGCCTGGTCATCCTCCAGCGTGAATGGATCGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1800230‑1800382 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccccgCCAGCAGCGCCATGCCAATGTCGCCTTCCTTGCCCGCGGACAGGGCAATCAGGCCCTCGCTGGCCGGGGCGATCCATTCACGCTGGAGGATGACCAGGCCATTGCGCTGGCCATCGGTCCAGCCGCGCGAGATCAGTTCGGTGAGGT  <  NC_002947/1800446‑1800300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.