| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1828572 | 96 (1.340) | 6 (0.090) | 6/262 | NT | 6.1% | coding (337/471 nt) | recX | regulatory protein RecX |
| ? | NC_002947 | = 1828611 | 92 (1.310) | coding (376/471 nt) | recX | regulatory protein RecX | |||||
GTATTCGCGAAGAGCTGTGTCAGCGTGGTTTGGCGCGTGCAGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1828468‑1828572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCACACGTCGCGCATACGCTCGCTCCAATTCACCTCGCTTTCACGCAGGGCCTGGTCGATATCTGCACGCGCCAAACCACGCTGACACAGCTCTTCGCGAATACGCGC < NC_002947/1828611‑1828464 GTATTCGCGAAGAGCTGTGTCAGCGTGGTTTGGCGCGTGCAGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGCTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCAC < 5:125549/149‑1 TTCGCGAAGAGCTGTGTCAGCGTGGTTTGGCGCGTGCAGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGCTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCACACG < 4:169690/149‑1 AGCGTGGTTTGGCGCGTGCAGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGCTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCACACGTC < 3:126201/133‑1 AGCGTGGTTTGGCGCGTGCAGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGCTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCACACGTC > 4:126201/1‑133 AGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGCTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCA > 5:392653/1‑108 AGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGCTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCA < 6:392653/108‑1 CTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCACACGTCGCGCATACGCTCGCTCCAATTCACCTCGCTTTCACGCAGGGCCTGGTCGATATCTGCACGCGCCAAACCACGCTGACACAGCTCTTCGCGAATACGCGC < 8:256958/149‑1 GTATTCGCGAAGAGCTGTGTCAGCGTGGTTTGGCGCGTGCAGATATCGACCAGGCCCTGCGTGAAAGCGAGGTGAATTGGAGCGAGCGTATGCGCGACGTGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1828468‑1828572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTGCGCGGATCTTGCGGGCGCTGCCCGGCAAACTTGCGCTGCCACACGTCGCGCATACGCTCGCTCCAATTCACCTCGCTTTCACGCAGGGCCTGGTCGATATCTGCACGCGCCAAACCACGCTGACACAGCTCTTCGCGAATACGCGC < NC_002947/1828611‑1828464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |