| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1908077 = | 60 (0.840) | 3 (0.040) | 3/252 | NT | 5.2% | coding (445/759 nt) | PP_1708 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 1908164 = | 53 (0.790) | coding (358/759 nt) | PP_1708 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
CCCGTCGACGAGCTGCCGTTGGAGAACTGGCGCAACGTCATCGCCACCAACGTCGATGGTGTATTCCTGTGCGCCCGCGCCGCCTTCGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGGCGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1908230‑1908077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcacaGGAATACACCATCGACGTTGGTGGCGATGACGTTGCGCCAGTTCTCCAACGGCAGCTCGTCGACGGGTACAGCGGGGGCGTTGATGCCGGCATTGTTGAACATCACATCGAGGCGGCCATGCACCTCCTCGATGGTGGCGAACAA > NC_002947/1908164‑1908308 CCCGTCGACGAGCTGCCGTTGGAGAACTGGCGCAACGTCATCGCCACCAACGTCGATGGTGTATTCCTGTGCGCCCGCGCCGCCTTCGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGGC < 6:92711/149‑1CCCGTCGACGAGCTGCCGTTGGAGAACTGGCGCAACGTCATCGCCACCAACGTCGATGGTGTATTCCTGTGCGCCCGCGCCGCCTTCGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGG < 2:75997/148‑1CCCGTCGACGAGCTGCCGTTGGAGAACTGGCGCAACGTCATCGCCACCAACGTCGATGGTGTATTCCTGTGCGCCCGCGCCGCCTTCGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGG < 7:282350/148‑1 CCTGTGCGCCCGCGCCGCCTTCGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGGCGCACAGGAATACACCATCGACGTTGGTGGCGATGACGTTGCGCCAGTTCTCCAACGGCAGCTCGT > 4:408952/1‑149 GCGCCGCCTTCGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGGCGCACAGGAATACACCATCGACGTTGGTGGCGATGACGTTGCGCCAGTTCTCCAACGGAAGCTAGTCGCCGGGTACA > 4:241400/1‑149 CGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGGCGCACAGGAATACACCATCGACGTTGGTGGCGATGACGTTGCGCCAGTTCTCCAACGGCAGCTCGTCGACGGGTACAGCGGGGGC < 3:408952/147‑1 CGCACAGGAATACACCATCGACGTTGGTGGCGATGACGTTGCGCCAGTTCTCCAACGGCAGCTCGTCGACGGGTACAGCGGGGGCGTTGATGCCGGCATTGTTGAACATCACATCGAGGCGGCCATGCACCTCCTCGATGGTGGCGAA > 7:49991/1‑148 CACAGGAATACACCATCGACGTTGGTGGCGATGACGTTGCGCCAGTTCTCCAACGGCAGCTCGTCGACGGGTACAGCGGGGGCGTTGATGCCGGCATTGTTGAACATCACATCGAGGCGGCCATGCACCTCCTCGATGGTGGCGAACAA < 5:92711/149‑1 CCCGTCGACGAGCTGCCGTTGGAGAACTGGCGCAACGTCATCGCCACCAACGTCGATGGTGTATTCCTGTGCGCCCGCGCCGCCTTCGGCCTTATGCGTCGCCAGCAGCCGCAAGGCGGGCGGATCATCAACAACGGCTCGATCTCGGCGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1908230‑1908077‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcacaGGAATACACCATCGACGTTGGTGGCGATGACGTTGCGCCAGTTCTCCAACGGCAGCTCGTCGACGGGTACAGCGGGGGCGTTGATGCCGGCATTGTTGAACATCACATCGAGGCGGCCATGCACCTCCTCGATGGTGGCGAACAA > NC_002947/1908164‑1908308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |