| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2073745 = | 57 (0.800) | 4 (0.060) | 4/256 | NT | 6.2% | coding (244/381 nt) | PP_1849 | hypothetical protein |
| ? | NC_002947 | 2073835 = | 66 (0.960) | coding (154/381 nt) | PP_1849 | hypothetical protein | |||||
CTCACCCGGTGAGCGGATTTCCCTGGCACGCATCAGCGACTTGCGGCTGGCCAGCCTGGAAACCAACCGCAGCCTTGGCAGCGCCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2073896‑2073745‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttggTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCCGCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCGATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCT > NC_002947/2073835‑2073982 CTCACCCGGTGAGCGGATTTCCCTGGCACGCATCAGCGACTTGCGGCTGACCAGCCTGGAAACCAACCGCAGCCTTGGCAGCGGCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGT > 4:272272/1‑149 ACCCGGTGAGCGGATTTCCCTGGCACGCATCAGCGACTTGCGGCTGGCCAGCCTGGAAACCACCCGCAGCCTTGGCAGCGCCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCATGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTT < 4:205085/147‑1 ACCCGGTGAGCGGATTTCCCTGGCACGCATCAGCGACTTGCGGCTGGCCAGCCTGGAAACCAACCGCAGCCTTGGCAGCGCCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTTGG < 3:131923/149‑1 CAGCCTGGAAACCAACCGCAGCCTTGGCAGCGCCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTTGGTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCC > 7:342531/1‑149 CAACCGCAGCCTTGGCAGCGCCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTTGGTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCCGCTCACCGGGT > 6:171523/1‑148 AGCCTTGGCAGCGCCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTTGGTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCCGCTCACCGGGTGAGGGGCT < 8:342531/149‑1 GTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTTGGTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCCGCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCC < 5:171523/149‑1 GTTGGTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCCGCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCGATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGA < 5:423289/149‑1 GTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCCGCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCGATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCT > 2:291970/1‑149 CTCACCCGGTGAGCGGATTTCCCTGGCACGCATCAGCGACTTGCGGCTGGCCAGCCTGGAAACCAACCGCAGCCTTGGCAGCGCCTTGGGCTGGGGCGTGGCCGGCGCCCTGGTGGCAGGGCCAGTAGGGCTGCTGGCCGGGCTGTGGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2073896‑2073745‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttggTTTCCAGGCTGGCCAGCCGCAAGTCGCTGATGCGTGCCAGGGAAATCCGCTCACCGGGTGAGGGGCTGCGCGCGGTCTTGAGTGTGAGCGATCCATTGCGATACTCGCCTTCACCTTGCAAGAAGTCGCCGGATTGCACCGTGAGTCT > NC_002947/2073835‑2073982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |