| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2175086 = | 61 (0.850) | 3 (0.050) | 3/248 | NT | 5.2% | coding (177/489 nt) | PP_1928 | arsenate reductase |
| ? | NC_002947 | 2175143 = | 52 (0.780) | coding (120/489 nt) | PP_1928 | arsenate reductase | |||||
TGAAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2175243‑2175086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagctgccAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAATGCGGCCA > NC_002947/2175143‑2175290 TGAAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTG < 1:164240/149‑1 GAAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCTGCAACGTCAATGAGCGGGCATGAAAAACCTTG > 1:152249/1‑148 AAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGG > 7:213606/1‑148 AAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGA < 3:225565/148‑1 AAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACATTGGA > 6:427729/1‑148 AGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCCAGGTCAATGAGCGGGCACTGACAACCTTGGAAG > 8:350245/1‑149 TCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCT > 6:280519/1‑149 AGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTG > 4:134523/1‑120 AGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTG < 3:134523/120‑1 TGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGT < 3:243038/135‑1 TGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGT > 4:243038/1‑135 GGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAAC > 3:101007/1‑148 GAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAA > 6:206845/1‑149 AAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAAAAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGGGGATGGCCAAT > 7:325131/1‑149 AGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAATG > 2:15475/1‑149 GCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAATGC < 4:82435/149‑1 CCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAATGCGGC > 7:206240/1‑148 CCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAATGCGG < 5:435074/147‑1 CAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAATGCGGCCA < 3:18748/149‑1 TGAAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2175243‑2175086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagctgccAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAAGCTCAGGCGGATGGCCAATGCGGCCA > NC_002947/2175143‑2175290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |