New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 224350574 (1.030)5 (0.070) 4/258 NT 6.1% coding (523/882 nt) PP_1979 hydrolase
?NC_002947 = 2243532 83 (1.200)coding (550/882 nt) PP_1979 hydrolase

TGCGGCTGAGTTGCCGCCCTTGCGTGCAGTCATTGGCCATTCCATGGGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2243354‑2243505
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccGTGCCCGTGCTGGCAGCCCCAGGCGATGGGCAAAACCA  <  NC_002947/2243532‑2243495
                                                                                                                                                                                              
TGCGGCTGAGTTGCCGCCCTTGCGTGCAGTCATTGGCCATTCCATGGGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTG                                           >  5:108155/1‑149
  CGGCTGAGTTGCCGCCCTTGCGTGCAGTCATTGGCCATTCCATGGGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGC                                          <  5:281358/148‑1
          TTGCCGCCCTTGCGTGCAGTCATTGGCCATTCCATGGGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGCCCGTGCCCG                                 >  7:393916/1‑149
                                   tCCATTCCATGTGTGTGTGAAGAGTGCTGCTGGTTTTGCTGATGGGGCTGCGCACTGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGCCCGTGCCCGTGCTGGCAGCCCCAGGCGATGGGC         <  6:280477/147‑1
                                   GCCATTCCATGGGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGCCCGTGCCCGTGCTGGCAGCCCCAGGCGATGGGC         <  8:393916/148‑1
                                              GGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGCCCGTGCCCGTGCTGGCAGCCCCAGGCGATGGGCAAAACCA  >  5:432704/1‑144
                                              GGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGCCCGTGCCCGTGCTGGCAGCCCCAGGCGATGGGCAAAACCA  <  6:432704/144‑1
                                                                                                                                                                                              
TGCGGCTGAGTTGCCGCCCTTGCGTGCAGTCATTGGCCATTCCATGGGTGGGGCAAGCGTGCTGCTGGCTTTGCAGATGGGGCTGCGCACAGAGGCGGCTGTCAGCATTGCAGCGCCGGCGCGGTTGCTCGGTGTGTTGCGTGGTTTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2243354‑2243505
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccGTGCCCGTGCTGGCAGCCCCAGGCGATGGGCAAAACCA  <  NC_002947/2243532‑2243495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.