| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2285157 = | 60 (0.840) | 4 (0.060) | 4/248 | NT | 7.2% | coding (410/972 nt) | PP_2013 | hypothetical protein |
| ? | NC_002947 | 2285260 = | 48 (0.720) | coding (513/972 nt) | PP_2013 | hypothetical protein | |||||
CGGTTGCACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2285313‑2285157‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgaacaCTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGCCGACACAGTGTGCAACCGCCTGTTGCGCGGTACCGACATGCGCCTGCCGGACGGGCTGACGCTGACCGGCGGCGACGGCCTGACCCGCGCGTTTTTCCGCACCAAGTT > NC_002947/2285260‑2285403 CGGTTGCACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTC < 7:390961/149‑1CGGTTGCACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTC < 3:314238/149‑1 GGTTGCACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTC > 3:313108/1‑148 TTGCACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGAT < 1:411452/149‑1 CACTCTGTGGCGGCAAAACTTTCACTGACCGGCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCTGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGT < 6:397419/142‑1 CACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGA < 3:190274/148‑1 CACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGAGGCCGTCGGGGTATTGCTGGAGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGCCGGAAGCGCCCTGCGT > 5:397419/1‑142 CTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGAAC < 1:63744/146‑1 CTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGAAC > 2:63744/1‑146 CTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGAACACTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGC > 5:347/1‑149 AAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGAACACTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGCCGACA > 4:45174/1‑147 AGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGAT > 4:1267/1‑100 AGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGAT < 3:1267/100‑1 GGGGTTTTGCTGGGGCAGCGGCTCGATCAGCCGCGGGTCCCAGCTGGCGTGCACCAGACGTAAGCGCCCTGCGTCGATGAACACTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGCCGACACAGTGTGCAACCGCCTGTTGCGCG < 6:347/148‑1 CCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGAACACTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGCCGACACAGTGTGCAACCGCCTGTTGCGCGGTACCGACATGCGCCTGCCGGACGGGCTGACGCTGACCG < 3:45174/148‑1 GATGAACACTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGCCGACACAGTGTGCAACCGCCTGTTGCGCGGTACCGACATGCGCCTGCCGGACGGGCTGACGCTGACCGGCGGCGACGGCCTGACCCGCGCGTTTTTCCGCACCAA < 5:134323/149‑1 AACACTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGCCGACACAGTGTGCAACCGCCTGTTGCGCGGTACCGACATGCGCCTGCCGGACGGGCTGACGCTGACCGGCGGCGACGGCCTGACCCGCGCGTTTTTCCGCACCAAGTT < 2:302669/148‑1 CGGTTGCACACTGTGTCGGCAAAACTGCCACTGACCGCCGAGGCCTGGATGAAGTGTTCATCGATGCGGCCGTCGGGGTATTGCTGGCGCAGCGGCTCGATCAGCCGCGGGTCCCAGCAGGCGTGCACCAGACGGAAGCGCCCTGCGTCGATGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2285313‑2285157‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatgaacaCTTCATCCAGGCCTCGGCGGTCAGTGGCAGTTTTGCCGACACAGTGTGCAACCGCCTGTTGCGCGGTACCGACATGCGCCTGCCGGACGGGCTGACGCTGACCGGCGGCGACGGCCTGACCCGCGCGTTTTTCCGCACCAAGTT > NC_002947/2285260‑2285403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |