| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2480389 | 86 (1.200) | 7 (0.100) | 7/256 | NT | 7.7% | coding (172/393 nt) | PP_2174 | hypothetical protein |
| ? | NC_002947 | = 2480422 | 86 (1.260) | coding (139/393 nt) | PP_2174 | hypothetical protein | |||||
GGGCAGAAAAGGAGTATCAAGCGTTCCCAGTGCTATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2480237‑2480389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCAGCATCAAGGCCTTTTCTTCATCACCGACGGTTACGCGCGAGTTCTGCACGGAGTGCGGCTCGACCTTGTTCTGGTCACGCGCCCAAGGTGAGTTTGCCGACTG < NC_002947/2480422‑2480280 aaGCAGAAAAGGAGTATCAAGCGTTCCCAGTGCTATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GG < 8:355915/147‑1GGGCAGAAAAGGAGTATCAAGCGTTCCCAGTGCTATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GG > 6:24442/1‑149 GGCAGAAAAGGAGTATCAAGCGTTCCCAGTGCTATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGC > 6:177370/1‑149 GGCAGAAAAGGAGTATCAAGCGTTCCCAGTGCTATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GG < 2:385320/148‑1 CAGAAAAGGAGTATCAAGCGTTCCCAGTGCTATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAG > 2:345448/1‑149 TATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGCATTCCGCGCAGCATGCTGCGAATACTGCG > 3:171254/1‑149 AAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGC‑‑GCCGCGCAGCATGCTGCGAATACTGC < 7:209024/141‑1 AAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGC‑‑GCCGCGCAGCATGCTGCGAATACTGC > 8:209024/1‑141 TCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCAGC < 4:171254/149‑1 GGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCTGGCAGCGCCGGCAGCATTCCGCGCAGCATGCTGCTAATACTGCGCGGCGCTGCCAGCATCAAGGC < 5:58398/149‑1 GAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCC < 5:287636/117‑1 GAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCC > 6:287636/1‑117 GGCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCAGCATCAAGGCCTTTTCTTCATCACCGACGGTTACGCGCGAGTTCTGCACGGAGTGCGGCTCGACCTTGTTCTGGTCACGCGCCCAAGGTGAGTTTGCCGACTG < 5:443581/149‑1 GCAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCAGCATCAAGGCCTTTTCTTCATCACCGACGGTTACGCGCGAGTTCTGCACGGAGTGCGGCTCGACCTTGTTCTGGTCACGCGCCCAAGGTGAGTTTGCCGACTG > 1:95443/1‑148 CAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCAGCATCAAGGCCTTTTCTTCATCACCGACGGTTACGCGCGAGTTCTGCACGGAGTGCGGCTCGACCT < 1:292665/110‑1 CAGCATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCAGCATCAAGGCCTTTTCTTCATCACCGACGGTTACGCGCGAGTTCTGCACGGAGTGCGGCTCGACCT > 2:292665/1‑110 GGGCAGAAAAGGAGTATCAAGCGTTCCCAGTGCTATCGAAATCCAGTCGGCAAACTCACCTTGGGCGCGTGACCAGAACAAGGTCGAGCCGCACTCCGTGCAGAACTCGCGCGTAACCGTCGGTGATGAAGAAAAGGCCTTGATGCT‑‑‑‑‑‑‑‑‑GGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2480237‑2480389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcATTCCGCGCAGCATGCTGCGAATACTGCGCGGCGCTGCCAGCATCAAGGCCTTTTCTTCATCACCGACGGTTACGCGCGAGTTCTGCACGGAGTGCGGCTCGACCTTGTTCTGGTCACGCGCCCAAGGTGAGTTTGCCGACTG < NC_002947/2480422‑2480280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |