| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2486359 = | 62 (0.870) | 4 (0.060) | 4/252 | NT | 6.7% | coding (951/1359 nt) | spuC‑I | polyamine:pyruvate transaminase |
| ? | NC_002947 | 2486403 = | 54 (0.800) | coding (995/1359 nt) | spuC‑I | polyamine:pyruvate transaminase | |||||
CCAGCGGGTGGTCGGCCAGTTCGCGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2486513‑2486359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgtggGCCTGGAGAACCTGCGGATCCTGCGTGACGAGCAGATCATCCAGCAGGTGCACGATAAAACCGCGCCTTATCTGCAACAACGCCTGCGCGAACTGGCCGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGA > NC_002947/2486403‑2486549 CCAGCGGGTGGTCAGCCAGTTCGCGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAG > 4:186280/1‑149 GGGTGGTCGGCCAGTTAGAGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCCCCGGGTGGCCGGAATAGGTGAAGCCGTG > 6:11136/1‑149 GGTGGTCGGCCAGTTCGCGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGG < 5:399916/149‑1 GGTGGTCGGCCAGTTCGCGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGG < 6:203921/149‑1 GGTGGTCGGCCAGTTCGCGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGG < 7:168575/149‑1 GGTGGTCGGCCAGTTCGCGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGG < 8:333984/149‑1 CAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGGGCCTGGAGAACCTGCGGATCCTGCGTGACGAGCAGATCATCCAGCAGGTGCACGATAAAACCGCGCCTTATCTGCAACAACGCCTGCGCGAACTGGCCGA > 4:181577/1‑149 ACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGGGCCTGGAGAACCTGCGGATCCTGCGTGACGAGCAGATCATCCAGCAGGTGCACGATAAAACCGCGCCTTATCTGCAACAACGCCTGCGCGAACTGGCCGACCACCCG > 6:63366/1‑149 GGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGGGCCTGGAGAACCTGCGGATCCTGCGTGACGAGCAGATCATCCAGCAGGTGCACGATAAAACCGCGCCTTATCTGCAACAACGCCTGCGCGAACTGGCCGA < 5:145485/140‑1 GGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGGGCCTGGAGAACCTGCGGATCCTGCGTGACGAGCAGATCATCCAGCAGGTGCACGATAAAACCGCGCCTTATCTGCAACAACGCCTGCGCGAACTGGCCGA > 6:145485/1‑140 GGCCTGGAGAACCTGCGGATCCTGCGTGACGAGCAGATCATCCAGCAGGTGCACGATAAAACCGCGCCTTATCTGCAACAACGCCTGCGCGAACTGGCCGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGA < 8:37627/148‑1 CCAGCGGGTGGTCGGCCAGTTCGCGCAGGCGTTGTTGCAGATAAGGCGCGGTTTTATCGTGCACCTGCTGGATGATCTGCTCGTCACGCAGGATCCGCAGGTTCTCCAGGCCCACGGCTGCCGCCACCGGGTGGCCGGAATAGGTGAAGCCGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2486513‑2486359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgtggGCCTGGAGAACCTGCGGATCCTGCGTGACGAGCAGATCATCCAGCAGGTGCACGATAAAACCGCGCCTTATCTGCAACAACGCCTGCGCGAACTGGCCGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGA > NC_002947/2486403‑2486549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |