New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2638199	70 (0.980)	4 (0.060)	4/254	NT	5.8%	coding (305/798 nt)	PP_2308	acyl‑CoA thioesterase II
	?	NC_002947	= 2638284	63 (0.930)					coding (390/798 nt)	PP_2308	acyl‑CoA thioesterase II

CGGTACGCTCATTGGCCATCAGCTTCGTGGCACCCGCGGCGGCGGATGTGCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2638046‑2638199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcaaCTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCCCGCACCGAAATTGCCCTGCACCAAAGTCACCACCTGGCCATCCTGAACAGCGCGGCCCAGCAACGTGCTAACC  <  NC_002947/2638284‑2638137                                                                                                                                                                                                                                                                                                                    CGGTACGCTCATTGGCCATCAGCTTCGTGGCACCCGCGGCGGCGGATGTGCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAG                                                                                                                                                               <  2:253779/149‑1  GGTACGCTCATTGGCCATCAGCTTCGTGGCACCCGCGGCGGCGGATGTGCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGG                                                                                                                                                              <  1:318075/149‑1  GGTACGCTCATTGGCCATCAGCTTCGTGGCACCCGCGGCGGCGGATGTGCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGG                                                                                                                                                              <  5:254079/149‑1  GGTACGCTCATTGGCCATCAGCTTCGTGGCACCCGCGGCGGCGGATGTGCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGG                                                                                                                                                              >  8:285671/1‑149   GTACGCTCATTGGCCATCAGCTTCGTGGCACCCGCGGCGGCGGATGTGCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTTAGGATGGCCAGGTGGTGACTTTGGTGCAGGG                                                                                                                                                             >  1:234151/1‑149                                                  GCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGG                                                                                                                                                              <  5:301762/101‑1                                                  GCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGG                                                                                                                                                              >  6:301762/1‑101                                                          GCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGGGCAACTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGC                                                                                                  >  2:316190/1‑149                                                                                     GCAAGGCGGTTAGCACGTTGCTGGGCCACGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGGGCAATTTCGGTGCGGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCC                                                                           <  4:60955/149‑1                                                                                                  CACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGGGACTTTGGTGCAGGGCAACTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCCCGCACCGAAATTGCCCT                                                          <  5:279507/149‑1                                                                                                   ACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGGGCAACTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCCCGCACCGAAATTGCCCTG                                                         <  1:316190/149‑1                                                                                                                                                     GGGCAACTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCACCGCCGGCACTTCGACCACCGAAGGGCGGCCCGCCCCGAAATTGCCCTGCACCAAAGTCACCACCTGGCCTTCCTGCACAGCGCGGCCCAGCACCGTGC       >  3:19523/1‑149                                                                                                                                                      GGCAACTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCC                                                                           <  3:276376/80‑1                                                                                                                                                      GGCAACTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCC                                                                           >  4:276376/1‑80                                                                                                                                                          ACTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCCCGCACCGAAATTGCCCTGCACCAAAGTCACCACCTGGCCATCCTGAACAGCGCGGCCCAGCAACGTGCTAACC  <  2:248917/149‑1                                                                                                                                                                                                                                                                                                                    CGGTACGCTCATTGGCCATCAGCTTCGTGGCACCCGCGGCGGCGGATGTGCCCATCCGCTTCGAGGTGGAGGTTTTGCGCGAAGGCAAGGCGGTTAGCACGTTGCTGGGCCGCGCTGTTCAGGATGGCCAGGTGGTGACTTTGGTGCAGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2638046‑2638199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcaaCTCCG‑‑‑‑GGGCCGCCTCATCGAGCGCAGGCATTTCGATGGCCGGCAACGCCGGCACTTCGACCACCGAAGGGCGGCCCGCACCGAAATTGCCCTGCACCAAAGTCACCACCTGGCCATCCTGAACAGCGCGGCCCAGCAACGTGCTAACC  <  NC_002947/2638284‑2638137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.