New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2840194	50 (0.700)	4 (0.060)	4/256	NT	7.0%	coding (388/678 nt)	PP_2491	ThiJ/PfpI family protein
	?	NC_002947	= 2840207	58 (0.850)					coding (375/678 nt)	PP_2491	ThiJ/PfpI family protein

TCCTCGACCAGGAACGGCACCACCTGGGTCAGGCCTACAGCCTCCTCTTCGCTGTTGCTGAAGCCGGTGACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2840046‑2840194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcCGGCAAGCCTGTTGCGGCGGTTT  <  NC_002947/2840207‑2840185                                                                                                                                                                              TCCTCGACCAGGAACGGCACCACCTGGGTCAGGCCTACAGCCTCCTCTTCGCTGTTGCTGAAGCCGGTGACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCG                          >  8:13234/1‑148                  CACCACCTGGGTCAGGCCTACAGCCTCCTCTTCGCTGTTGCTGAAGCCGGTGACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCG                          <  6:49777/131‑1                  CACCACCAGGGTCAGGCCTACAGCCTCCTCTTCGCTGTTGCTGAAGCCGGTGACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCG                          >  5:49777/1‑131                                       AGCCTCCTCTTCGCTGTTGCTGAAGCCGGTGACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCGC                         <  3:121830/111‑1                                       AGCCTCCTCTTCGCTGTTGCTGAAGCCGGTGACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCGC                         >  4:121830/1‑111                                                                      ACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGTCGCAGCACCGCGGGCGCATGGCAAACCGCCGCCGGCAAGCCTGTTGCGGCGGTTT  <  2:132294/103‑1                                                                      ACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCGCCGGCAAGCCTGTTGCGGCGGTTT  >  1:132294/1‑103                                                                        CGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCGCCGGCAAGCCTGTTGCGGCGGT    <  1:156250/99‑1                                                                        CGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCGCCGGCAAGCCTGTTGCGGCGGT    >  2:156250/1‑99                                                                                                                                                                              TCCTCGACCAGGAACGGCACCACCTGGGTCAGGCCTACAGCCTCCTCTTCGCTGTTGCTGAAGCCGGTGACCGCCTTGCCGGCGACCAATGGCTGGCCGTCGCTGCCCTTGACGTGACGCAGCACCGCGGGCGCATGGCAAACCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2840046‑2840194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgcCGGCAAGCCTGTTGCGGCGGTTT  <  NC_002947/2840207‑2840185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.