| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2895376 = | 59 (0.820) | 5 (0.070) | 5/256 | NT | 8.2% | coding (1035/1392 nt) | PP_2549 | hypothetical protein |
| ? | NC_002947 | 2895416 = | 55 (0.800) | coding (1075/1392 nt) | PP_2549 | hypothetical protein | |||||
CAGCCCCAGCGCCAGCGACGAAAGAATCTGCCCGCCCATGTGGCACGGGCCAACACCGCTGCCGGAGTAACCAAAGCCATAGAACACGTTGCCCTGCCCATCCAACCGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2895529‑2895376‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgttcTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCGCTGGGGCTGGACAACCCGTGGACCCGGTCGCCGCTG > NC_002947/2895416‑2895556 CAGCCCCAGCGCCAGCGACGAAAGAATCTGCCCGCCCATGTGGCACGGGCCAACACCGCTGCCGGAGTAACCAAAGCCATAGATCACGTTGCCCTGCCCATCCAACCGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCC > 7:199900/1‑149CAGCCCCAGCGCCAGCGACGAAAGAATCTGCCCGCCCATGTGGCACGGGCCAACACCGCTGCCGGAGTAACCAAAGCCATAGAACACGTTGCCCTGCCCATCCAACCGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCC < 7:407694/149‑1 CCAGCGCCAGCGACGAAAGAATCTGCCCGCCCATGTGGCACGGGCTAACACCGCTGCCGGAGTAACCAAAGCCATAGAACACGTTGCCCTGCCCATCCAACCGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTC > 8:176504/1‑149 CCAGCGCCAGCGACGAAAGAATCTGCCCGCCCATGTGGCACGGGCCAACACCGCTGCCGGAGTAACCAAAGCCATAGAACACGTTGCCCTGCCCATCCAACCGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTC > 2:278375/1‑149 CCAGCGCCAGCGACGAAAGAATCTGCCCGCCCATGTGGCACGGGCCAACACCGCTGCCGGAGTAACCAAAGCCATAGAACACGTTGCCCTGCCCATCCAACCGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTC < 4:107642/149‑1 CCAGCGCCAGCGACGAAAGAATCTGCCCCCCCATCTGGCACGGGCAAACACCGCTGACGGAGTAACCAAAGCCATAGAACACGTTGCCCTGCCCATCCAACAGACCAAAGAACGGCAGGCCCTTTACTGATCGATCGGACGGCCCGTTC > 3:241229/1‑149 CGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCT > 5:59708/1‑149 GACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGGTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTG > 5:140088/1‑149 ACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGG > 2:1042/1‑149 CAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCG > 2:196120/1‑149 GGTTACTGATCGATCGGACGGCCCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCGCTGGGGCTGGACAACC < 6:140088/149‑1 GGCCCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCGCTGGGGCTGGACAACCCGTGGACCCGGTCGCCGCT < 1:196120/149‑1 CCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCGCTGGGGCTGGACAACCCGTGGACCCGGTCGCCGCTG < 3:397195/147‑1 CCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCG < 7:117446/111‑1 CCGTTCTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCG > 8:117446/1‑111 CAGCCCCAGCGCCAGCGACGAAAGAATCTGCCCGCCCATGTGGCACGGGCCAACACCGCTGCCGGAGTAACCAAAGCCATAGAACACGTTGCCCTGCCCATCCAACCGACCAAAGAACGGCAGGCCGGTTACTGATCGATCGGACGGCCCGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2895529‑2895376‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgttcTTTGGTCGGTTGGATGGGCAGGGCAACGTGTTCTATGGCTTTGGTTACTCCGGCAGCGGTGTTGGCCCGTGCCACATGGGCGGGCAGATTCTTTCGTCGCTGGCGCTGGGGCTGGACAACCCGTGGACCCGGTCGCCGCTG > NC_002947/2895416‑2895556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |