| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2976750 = | 53 (0.740) | 4 (0.060) | 4/250 | NT | 7.4% | coding (686/816 nt) | PP_2603 | hypothetical protein |
| ? | NC_002947 | 2976817 = | 50 (0.750) | coding (753/816 nt) | PP_2603 | hypothetical protein | |||||
CATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2976900‑2976750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTC > NC_002947/2976817‑2976958 CATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGC > 5:405328/1‑149CATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGC < 6:232699/149‑1 TGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGT < 3:108366/149‑1 ACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGT < 3:17494/143‑1 ACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGT > 4:17494/1‑143 GCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATG > 2:2788/1‑149 CCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGG > 2:116112/1‑149 AGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTA < 1:116112/149‑1 GGCACGCTCGGCGGCAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGC < 1:2788/149‑1 CAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGT > 8:136935/1‑149 CAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGC < 3:152119/135‑1 CAAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGC > 4:152119/1‑135 AAGGCGTCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTC < 1:63046/149‑1 CATGCGCCACGTTCGCTCGATCAGACCGCGGCCAATACCGCCTGGGCTTTCTCCAGCGCCATGCGCGCGCGCTGTTCGCCACTGACGCCTTGCTCCAGCAATTGCCGCGTGGGGATTTCCAGGCTCAGCGGCACGCTCGGCGGCAAGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2976900‑2976750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcgtCAGTGGCGAACAGCGCGCGCGCATGGCGCTGGAGAAAGCCCAGGCGGTATTGGCCGCGGTCTGATCGAGCGAACGTGGCGCATGGCACCGGTTACGCCACGTTCGCGAGTGAACCCACACCGAACGCTGCATTGTCGTTGTC > NC_002947/2976817‑2976958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |