| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3056149 = | 61 (0.850) | 3 (0.040) | 3/252 | NT | 5.1% | coding (213/741 nt) | PP_2668 | ABC transporter ATP‑binding protein |
| ? | NC_002947 | 3056199 = | 55 (0.820) | coding (163/741 nt) | PP_2668 | ABC transporter ATP‑binding protein | |||||
GCAGGTCGGTTTCAGCCTGGCACCCGGGCGCTTCGCCGCATTGCTGGGCCCCAATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3056302‑3056149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgcaGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGTCACT > NC_002947/3056199‑3056343 GCAGGTCGGTTTCAGCCTGGCACCCGGGCGCTTCGCCGCATTGCTGGGCCCCAATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACG < 4:355177/149‑1 ATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTG < 3:309480/99‑1 ATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTG > 4:309480/1‑99 GCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGC > 8:278766/1‑147 GACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCT > 5:246543/1‑145 GACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCT < 6:246543/145‑1 AACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACG < 7:278766/149‑1 ACGCTGCAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATACGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGT > 6:379700/1‑149 CAGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGTCACT < 7:216324/147‑1 GCAGGTCGGTTTCAGCCTGGCACCCGGGCGCTTCGCCGCATTGCTGGGCCCCAATGGTGCCGGCAAGTCGACCTTGATCGCCCTGCTCACGCGCCTGTACGACCTGCAGCGTGGCGACATCCGCGTGTGCGGCTGCTCGCTACGCAACGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3056302‑3056149‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgcaGGTCGTACAGGCGCGTGAGCAGGGCGATCAAGGTCGACTTGCCGGCACCATTGGGGCCCAGCAATGCGGCGAAGCGCCCGGGTGCCAGGCTGAAACCGACCTGCCGGAGTGCCTCGCGCTGGCCATAGGCAAAGCTCACGTCACT > NC_002947/3056199‑3056343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |