New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3170752 | 47 (0.660) | 6 (0.090) | 6/258 | NT | 11.3% | coding (2647/2880 nt) | PP_2782 | class III pyridoxalphosphate dependent aminotransferase |
? | NC_002947 | = 3170795 | 49 (0.710) | coding (2690/2880 nt) | PP_2782 | class III pyridoxalphosphate dependent aminotransferase |
GCACGTATTGTCCTGTGCGCTGCCAATGCGCCTCAGCCGTTCCTCGGTGCCGAACATTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3170602‑3170752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgTTGG‑GCGCCAGGCCGTCGTCGAACGGCGTCTGGACGATGCCGCCGTGCATGTAG < NC_002947/3170795‑3170742 GCACGTATTGTCCTGTGCGCTGCCAATGCGCCTCAGCCGTTCCTCGGTGCCGAACATTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCA > 2:3257/1‑149 GCACGTATTGTCCTGTGCGCTGCCAATGCGCCTCAGCCGTTCCTCGGTGCCGAACATTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCA < 6:417327/149‑1 GCTGCCAATGCGCCTCAGCCGTTCCTCGGTGCCGAACATTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCACGTTGG‑GCGCCAGGCCGT > 2:89739/1‑149 GCCGTTCCTCGGTGCCGAACATTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACATGCCGAGCCAACGCGAAGACGTGCTCTACATGCACGTTGG‑GCGCCAGGCCGTCGTCGAACGGCGTCTG > 4:343950/1‑148 AACATTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCACGTTGGCGCGCCAGGCCGTCGTCGAACGGCGTCTGGACGATGCCGCCGTGCA < 1:89739/149‑1 TTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCACGTTGG‑GCGCCAGGCCGTCGTCGAACGGCGTCTGGACGATGCCGCCGTGCATGTAG < 3:343950/149‑1 CCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCACGTTGG‑GCGCCAGGCCGTCGTCGAACGGCGTCTGGACGATGCCGCCGT < 3:261752/136‑1 CCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCACGTTGG‑GCGCCAGGCCGTCGTCGAACGGCGTCTGGACGATGCCGCCGT > 4:261752/1‑136 GCACGTATTGTCCTGTGCGCTGCCAATGCGCCTCAGCCGTTCCTCGGTGCCGAACATTTTGCCGAGCGCAGCGTGATTTGCGATATCGCCGTGCCGCTGAACGTCCATCAAGACCTGCCGAGCCAACGCGAAGACGTGCTCTACATGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3170602‑3170752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgTTGG‑GCGCCAGGCCGTCGTCGAACGGCGTCTGGACGATGCCGCCGTGCATGTAG < NC_002947/3170795‑3170742 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |