| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3647622 | 72 (1.010) | 4 (0.060) | 3/252 | NT | 5.9% | intergenic (‑559/‑95) | PP_3213/PP_3214 | ABC transporter substrate‑binding protein/hypothetical protein |
| ? | NC_002947 | = 3647672 | 59 (0.880) | intergenic (‑609/‑45) | PP_3213/PP_3214 | ABC transporter substrate‑binding protein/hypothetical protein | |||||
ATTGATGATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGCAAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3647468‑3647622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagggtATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCCGGGGGAGCGGCGCAAGGCCGCCAGAGCAATGTCCCATGCCATCTTTGGGCACTGACCGCTTCTACTCGAGTTAGCGCAAAGCAGGGC < NC_002947/3647672‑3647527 ATTGATGATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGC < 5:93955/149‑1ATTGATGATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGG > 5:229174/1‑148ATTGATGATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGG < 6:358654/148‑1 TGATGATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGAGCTAACTCTAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTTGCGGCCTTGCGCCGCTCCCCCGGC > 7:295135/1‑147 ATGATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGCAAGG < 1:52679/149‑1 ATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGCAAGGGT < 2:107723/148‑1 CTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGCAAGGGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCC < 8:160374/149‑1 CTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGCAAGGGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTG < 3:400249/147‑1 TGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGCAAGGGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCCGCTCATGCCGAGGCGCCACCCTTGCCGG < 1:247625/148‑1 TGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCAGCAAGGGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCCGG < 8:113896/148‑1 AAGGGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCCGGGGGAGCGGCGCAAGGCCGCCAGAGCAATGTCCCATGCCATCTTTGGGCACTGACCGCTTCTACTCGAGTTAGCGCAAAGCAG < 2:336314/149‑1 AGGGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCCGGGGGAGCGGCGCAAGGCCGCCAGAGCAATGTCCCATGCCATCTTTGGGCACTGACCGCTTCTACTCGAGTTAGCGCAAAGCAGG < 3:152918/149‑1 GGGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCCGGGGGAGCGGCGCAAGGCCGCCAGAGCAATGTCCCATGCCATCTTTGGGCACTGACCGCTTCTACTCGAGTTAGCGCAAAGCAGGG < 7:310680/149‑1 GGTATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCCGGGGGAGCGGCGCAAGGCCGCCAGAGCAATGTCCCATGCCATCTTTGGGCACTGACCGCTTCTACTCGAGTTAGCGCAAAGCAGGGC < 5:125648/149‑1 ATTGATGATTAGGATTGCTCACAATAAGCAATTTACGTGTATCCGATTAGTTGGCACGCGCCCTGCTTTGCGCTAACTCGAGTAGAAGCGGTCAGTGCCCAAAGATGGCATGGGACATTGCTCTGGCGGCCTTGCGCCGCTCCCCCGGCAAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3647468‑3647622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagggtATGCAGCAGCGGACGACCTCTCCTCTGGCCCCGGCTCATGCCGAGGCGCCACCCTTGCCGGGGGAGCGGCGCAAGGCCGCCAGAGCAATGTCCCATGCCATCTTTGGGCACTGACCGCTTCTACTCGAGTTAGCGCAAAGCAGGGC < NC_002947/3647672‑3647527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |