New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3670801	50 (0.700)	3 (0.040)	3/258	NT	5.4%	coding (332/726 nt)	PP_5591	hypothetical protein
	?	NC_002947	= 3670835	56 (0.810)					coding (298/726 nt)	PP_5591	hypothetical protein

GCCACCAGCCACTGCTGCTGTCACGCGGCAGTAGCGACAGCCAGGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3670652‑3670801 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggTTGCTGGCCATCAGTCGCGCCGATGGCCTGCTGCCCTTGCTGGGTGCGCTGGATGAGATTCGCTGTTGGCTGCCCTGGATACAATTGCAGCTGTCACATGACGGCATTGCAGTTGAACTGCTGCCAGACGATTGTCGAACCTGGCTGT  <  NC_002947/3670835‑3670688                                                                                                                                                                                                                                                                                                            GCCACCAGCCACTGCTGCTGTCACGCGGCAGTAGCGACAGCCAGGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAA                                                                                                                                                        <  5:310109/148‑1  CCACCAGCCACTGCTGCTGTCACGCGGCAGTAGCGACAGCCAGGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAGG                                                                                                                                                      >  4:31367/1‑149  CCACCAGCCACTGCTGCTGTCACGCGGCAGTAGCGACAGCCAGGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAGG                                                                                                                                                      <  5:94302/149‑1  CCACCAGCCACTGCTGCTGTCACGCGGCAGTAGCGACAGCCAGGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAG                                                                                                                                                       <  3:262697/148‑1  CCACCAGCCACTGCTGCTGTCACGCGGCAGTAGCGACAGCCAGGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAG                                                                                                                                                       <  5:391799/148‑1                                            GGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAGGTTGCTGGCCATCAGTCGCGCCGATGGCCTGCTGCCCTTGCTG                                                                                                            <  2:298271/149‑1                                                                               TGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAGGTTGCTGGCCATCAGTCGCGCCGATGGCCTGCTGCCCTTGCTGG                                                                                                           <  5:32180/115‑1                                                                               TGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAGGTTGCTGGCCATCAGTCGCGCCGATGGCCTGCTGCCCTTGCTGG                                                                                                           >  6:32180/1‑115                                                                                                                                                    AGGTTGCTGGCCATCAGTCGCGCCGATGGCCTGCTGCCCTTGCTGGGTGCGCTGGATGAGATTCGCTGTTGGCTGCCCTGGATACAATTGCAGCTGTCACATGACGGCATTGCAGTTGAACTGCTGCCAGACGATTGTCGAACCTGGCT    <  8:283413/149‑1                                                                                                                                                      GTTGCTGGCCATCAGTCGCGCCGATGGCCTGCTGCCCTTGCTGGGTGCGCTGGATGAGATTCGCTGTTGGCTGCCCTGGATACAATTGCAGCTGTCACATGACGGCATTGCAGTTGAACTGCTGCCAGACGATTGTCGAACCTGGCTGT  <  1:380525/149‑1                                                                                                                                                                                                                                                                                                            GCCACCAGCCACTGCTGCTGTCACGCGGCAGTAGCGACAGCCAGGTTCGACAATCGTCTGGCAGCAGTTCAACTGCAATGCCGTCATGTGACAGCTGCAATTGTATCCAGGGCAGCCAACAGCGAATCTCATCCAGCGCACCCAGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3670652‑3670801 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggTTGCTGGCCATCAGTCGCGCCGATGGCCTGCTGCCCTTGCTGGGTGCGCTGGATGAGATTCGCTGTTGGCTGCCCTGGATACAATTGCAGCTGTCACATGACGGCATTGCAGTTGAACTGCTGCCAGACGATTGTCGAACCTGGCTGT  <  NC_002947/3670835‑3670688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.