New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3673395 | 70 (0.980) | 4 (0.060) | 4/258 | NT | 5.7% | coding (443/891 nt) | PP_3237 | universal stress protein family protein |
? | NC_002947 | = 3673431 | 64 (0.930) | coding (479/891 nt) | PP_3237 | universal stress protein family protein |
ATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3673244‑3673395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGG < NC_002947/3673431‑3673386 ATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCCCTTGACTGGAAACTGTTGCGCCCCTGCCCGGTCCCGGTCTACCTGCTCCGGGCCACCCG > 1:48411/1‑149 TGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGC > 8:20556/1‑148 CTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAAC > 3:249805/1‑149 CAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGG < 4:249805/149‑1 TCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGG < 7:20556/149‑1 ATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3673244‑3673395 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGG < NC_002947/3673431‑3673386 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |