New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3690761	56 (0.780)	5 (0.080)	5/248	NT	8.7%	coding (462/660 nt)	PP_3256	group 2 family glycosyl transferase
	?	NC_002947	= 3690788	53 (0.800)					coding (435/660 nt)	PP_3256	group 2 family glycosyl transferase

TCGCGGGCGCGGCTGTCACGTCGACTGCTGGTGGCCACACTATGCCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGGCATCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3690606‑3690761 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcggcaTGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCCTATGAGCGTGTGGGTGGCTTTCAGCCCCTCGCGGCGCATGAAGATGTGCAGCTGGTCAGCGACCTACAGGCCAGCGGCGCCCAGATCGTCTGGACCGCCAGGCATAGTGTG  <  NC_002947/3690788‑3690641                                                                                                                                                                                                                                                                                                                  TCGCGGGCGCGGCTGTCACGTCGACTGCTGGTGGCCACACTATGCCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGG                                                                                                                                                              >  2:436349/1‑148    cgtGCGCGGCTGTCACGTCGACTGCTGGTGGCCACACTTTGCCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCGTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCGACCCAGACGCTCATAGGCATC                                                                                                                                                          <  4:86823/146‑1       GCGCGGCTGTCACGTCGACTGCTGGTGGCCACACTATGCCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGGCATCGG                                                                                                                                                        >  4:268449/1‑148               GTCACGTCGACTGCTGGTGGCCACACTATGCCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGGCATCGGCATGTGCAC                                                                                                                                               >  2:206112/1‑149                                TGGCCACACTATGCCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCT‑‑‑‑‑‑CATCGGCATGTGCACGGCGCAAACCTGGGGGTTTGTGC                                                                                                                        <  7:22959/149‑1                                             CCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGGCATCGGCATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCC                                                                                                                 <  1:206112/149‑1                                                     TCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGGCATCGGCATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGAT                                                                                                                    >  7:126739/1‑138                                                     TCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGGCATCGGCATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGAT                                                                                                                    <  8:126739/138‑1                                                                                                                                                    GCATGGGCATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCCTATGAGCGTGTGGGTGGCTTTCAGCCCCTCGCGGCGCATGAAGATGTGCAGCTGGTCAGCGACCTACAGGCCAGCGGCGCCCAGATCGTCTGGACCGCCAGG           <  7:268486/148‑1                                                                                                                                                     CATCGGCATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCCTATGAGCGTGTGGGTGGCTTTCAGCCCCTCGCGGCGCATGAAGATGTGCAGCTG                                                           <  3:164709/99‑1                                                                                                                                                     CATCGGCATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCCTATGAGCGTGTGGGTGGCTTTCAGCCCCTCGCGGCGCATGAAGATGTGCAGCTG                                                           >  4:164709/1‑99                                                                                                                                                         GGCATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCCTATGAGCGTGTGGGTGGCTTTCAGCCCCTCGCGGCGCATGAAGATGTGCAGCTGGTCAGCGACCTACAGGCCAGCGGCGCCCAGATCGTCTGGACCGCCAGGCATAGT     <  1:397349/149‑1                                                                                                                                                            ATGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCCTATGAGCGTGTGGGTGGCTTTCAGCCCCTCGCGGCGCATGAAGATGTGCAGCTGGTCAGCGACCTACAGGCCAGCGGCGCCCAGATCGTCTGGACCGCCAGGCATAGTGTG  <  6:385501/149‑1                                                                                                                                                                                                                                                                                                                  TCGCGGGCGCGGCTGTCACGTCGACTGCTGGTGGCCACACTATGCCTGGCGGTCCAGACGATCTGGGCGCCGCTGGCCTGTAGGTCGCTGACCAGCTGCACATCTTCATGCGCCGCGAGGGGCTGAAAGCCACCCACACGCTCATAGGCATCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3690606‑3690761 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcggcaTGTGCACGGCGCAAACCTGGGGGTTTGTGCCGATGCCTATGAGCGTGTGGGTGGCTTTCAGCCCCTCGCGGCGCATGAAGATGTGCAGCTGGTCAGCGACCTACAGGCCAGCGGCGCCCAGATCGTCTGGACCGCCAGGCATAGTGTG  <  NC_002947/3690788‑3690641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.