New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3693091	70 (0.980)	4 (0.060)	4/254	NT	5.3%	coding (535/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein
	?	NC_002947	= 3693114	78 (1.150)					coding (512/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein

TTCACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3692939‑3693091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactggcAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGAGGTGGCGTTCAACGATACCCCAGGCACGCTCATCGGCACGCCAGGCCAATACCTCTCGCGCCCTGGCTTCTGGCAAGGCGGTGCGGGTATCGCCGCCTGCTGGTACGGCGCA  <  NC_002947/3693114‑3692969                                                                                                                                                                                                                                                                                                             TTCACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACAC                                                                                                                                                        >  4:56365/1‑149  TCACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACT                                                                                                                                                       >  5:50641/1‑149    ACGCAGGTAATCCGCCAGCGCCTCGTCTGCGCCGTACCAGGAGGCGGCGATACCCGCACCGCCTTGCCAGTAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGG                                                                                                                                                     <  3:91527/149‑1    ACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGG                                                                                                                                                     <  3:289362/149‑1    ACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGG                                                                                                                                                     <  6:259171/149‑1    ACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGG                                                                                                                                                     >  6:96579/1‑149    ACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGG                                                                                                                                                     >  8:187837/1‑149     CGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGGC                                                                                                                                                    >  5:159682/1‑149                                  GCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGGCAGGCCGTTGGCATGGCCACTACCGCCAGT                                                                                                                       >  6:25332/1‑149                                   CCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGGCAGGCCGTTGGCATGGCCACTACCGCCAGTG                                                                                                                      <  3:99148/149‑1                                        CCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCATCTCGACACTGGCAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGA                                                                                                                  <  1:95076/148‑1                                        CCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGGCAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGAG                                                                                                                 <  5:25332/149‑1                                                                                                                                                   CACTGGCAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGAGGTGGCGTTCAACGATACCCCAGGCACGCTCATCGGCACGCCAGGCCAATACCTCTCGCGCCCTGGCTTCTGGCAAGGCGGTGCGGGTATCGCCGCCTGCTGGTACGG      >  5:96579/1‑149                                                                                                                                                    ACTGGCAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGAGGTGGCGTTCAGCGCTCCCCGAGGCACGCTCGTCGGCACGCGAGGCGAGTACCTCTCGCGCCCTGGCTTCTGGCAAGGCGGTGCGGGTATCGCCGCCTGCGGGTACGGC     >  7:399742/1‑149                                                                                                                                                     CTGGCAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGAGGTGGCGTTCAACGATACCCCAGGCACGCTCATCGGCACGCCAGGCCAATACCTCTCGCGCCCTGGCTTCTGGCAAGGCGGTGCGGGTATCGCCGCCTGCTGGTACGGCG    >  2:217585/1‑149                                                                                                                                                        GCAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGAGGTGGCGTTCAACGATACCCCAGGCACGCTCATCGGCACGCCAGGCCAATACCTCTCGCGCCCTGGCTTCTGGCAAGGCGGTGCGGGTATCGCCGCCTGCTGGTACGGCGCA  <  1:286777/148‑1                                                                                                                                                                                                                                                                                                             TTCACGCAGGTAATCCGCCAGCGCCTCGGCTGCGCCGTACCAGCAGGCGGCGATACCCGCACCGCCTTGCCAGAAGCCAGGGCGCGAGAGGTATTGGCCTGGCGTGCCGATGAGCGTGCCTGGGGTATCGTTGAACGCCACCTCGACACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3692939‑3693091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cactggcAGGCCGTTGGCATGGCCACTACCGCCAGTGTCGAGGTGGCGTTCAACGATACCCCAGGCACGCTCATCGGCACGCCAGGCCAATACCTCTCGCGCCCTGGCTTCTGGCAAGGCGGTGCGGGTATCGCCGCCTGCTGGTACGGCGCA  <  NC_002947/3693114‑3692969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.