New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3823349 | 72 (1.010) | 4 (0.060) | 4/250 | NT | 5.2% | coding (841/951 nt) | kguK | 2‑ketogluconokinase |
? | NC_002947 | = 3823375 | 78 (1.170) | coding (815/951 nt) | kguK | 2‑ketogluconokinase |
CCTGAGCTTGTTGTTTTTGTTGCAACAGGTGATTCGGGATCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3823195‑3823349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgctacTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGCGCGGCAACTGGTGCGGCAGCCGTGCCGTGCAGTCGCGTGGCGACATGGAAGGGCTGCCGCTGCGCCATGAGCTGGAGGCCTACGACCTGCGCAGAAGCGCATGAGCCG < NC_002947/3823375‑3823235 CCTGAGCTTGTTGTTTTTGTTGCAACAGGTGATTCGGGATCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGACACGGCTGCCGCACCAGTTGCCGCG > 6:82182/1‑149 CTGAGCTTGTTGTTTTTGTTGCAACAGGTGATTCGGGATCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGC < 8:46593/149‑1 CTGAGCTTGTTGTTTTTGTTGCAACAGGTGATTCGGGATCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGC > 8:60935/1‑149 CTTGTTGTTTTTGTTGCAACAGGTGATTCGGGATCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTAC > 1:105646/1‑149 GCAACAGGTGATTCGGGATCGGTTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTA > 7:277518/1‑133 GCAACAGGTGATTCGGGATCGGTTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTA < 8:277518/133‑1 GATCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTACTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGC > 1:338958/1‑149 TCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTACTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGC > 3:413551/1‑149 GGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTACTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGCG < 2:338958/148‑1 GCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTACTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGCGCG < 4:413551/149‑1 CGCGCTACTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGCGCGGCAACTGGTGCGGCAGCCGTGCCGTGCAGTCGCGTGGCGACATGGAAGGGCTGCCGCTGCGCCATGAGCTGGAGGCCTACGACCTGCGCAGAAGCGCATGAGCC > 1:231800/1‑148 CGCGCTACTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGCGCGGCAACTGGTGCGGCAGCCGTGCCGTGCAGTCGCGTGGCGACATGGAAGGGCTGCCGCTGCGCAATGAGCTGGAGGCCTACGACCTGCGCAGAAGCGCATGAGCCG < 1:82520/149‑1 CGCGCTACTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGCGCGGCAACTGGGGCGGCAGCCGTGCCGTGCAGTCGCGTGGCGACATGGAAGGGCTGCCGCTGCGCCATGAGCTGGAGGCCTACGACCTGCGCAGAAGCGCATGAGCCG < 6:36478/149‑1 CCTGAGCTTGTTGTTTTTGTTGCAACAGGTGATTCGGGATCGGCTCATGCGCTTCTGCGCAGGTCGTAGGCCTCCAGCTCATGGCGCAGCGGCAGCCCTTCCATGTCGCCACGCGACTGCACGGCACGGCTGCCGCACCAGTTGCCGCGCGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3823195‑3823349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgctacTGGAGGGCCGTCCGGTAGCCGAGGCGGTAGCGCGCGGCAACTGGTGCGGCAGCCGTGCCGTGCAGTCGCGTGGCGACATGGAAGGGCTGCCGCTGCGCCATGAGCTGGAGGCCTACGACCTGCGCAGAAGCGCATGAGCCG < NC_002947/3823375‑3823235 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |