New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3989295	65 (0.910)	4 (0.060)	4/256	NT	6.1%	coding (1813/2085 nt)	oplA	5‑oxoprolinase A
	?	NC_002947	= 3989343	61 (0.890)					coding (1861/2085 nt)	oplA	5‑oxoprolinase A

TTCATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3989146‑3989295 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCACTCCAGGTTCACCAGCTCCACCGGGCTGGCGGGTTCGCTGTACGAGTACAGGGTCTGGTGCCGGCTGTGGAAGCGGCTGATCAGCGCGG  <  NC_002947/3989343‑3989200                                                                                                                                                                                                                                                                                                        TTCATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCG                                                                                                                                                   <  5:327867/149‑1   CATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGG                                                                                                                                                  <  4:140161/148‑1   CATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGG                                                                                                                                                  <  8:411139/148‑1                                                      GCCGCGCTGATCAGCCGCTTCCACAGGCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCGGGTGGAGCTGGTGATCCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGA                                                                                              <  5:45588/149‑1                                                       CCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAG                                                                                             <  3:213747/149‑1                                                                          CCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCA                                                                                           <  7:336648/132‑1                                                                          CCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCA                                                                                           >  8:336648/1‑132                                                                                                                                                 GCTCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCACTCCAGGTTCACCAGCTCCACCGGGCTGGCGGGTTCGCTGTACGAGTACAGGGTCTGGTGCCGGCTGTGGAAGCGGCTGATCAGCGCG   <  2:277584/149‑1                                                                                                                                                  ccCGGCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCACTCCAGGTTCACCAGCTCCACCGGGCTGGCGGGTTCGCTGTACGAGTACAGGGTCTGGTGCCGGCCGTGGAAGCGGCTGATCAGCGCGG  <  8:323853/147‑1                                                                                                                                                      GCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCACTCCAGGTTCACCAGCTCCACCGGGCTGGCGGGTTCGCTGTACGAGTACAGGGTCTG                                  >  7:89510/1‑113                                                                                                                                                      GCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCACTCCAGGTTCACCAGCTCCACCGGGCTGGCGGGTTCGCTGTACGAGTACAGGGTCTG                                  <  8:89510/113‑1                                                                                                                                                                                                                                                                                                        TTCATGAGTGCAGTGTGGACCTGCAGCAGCACAGCCTGGACGAGGCAGGGCTGGCCGCGCTGATCAGCCGCTTCCACAGCCGGCACCAGACCCTGTACTCGTACAGCGAACCCGCCAGCCCGGTGGAGCTGGTGAACCTGGAGTGCTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3989146‑3989295 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggCCGGCCCCTGCAGCTCGGGTTGCGGCGGGCGTGGCAGGTGGCCGATCACCGAGCACTCCAGGTTCACCAGCTCCACCGGGCTGGCGGGTTCGCTGTACGAGTACAGGGTCTGGTGCCGGCTGTGGAAGCGGCTGATCAGCGCGG  <  NC_002947/3989343‑3989200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.