| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4036023 | 60 (0.840) | 3 (0.040) | 3/252 | NT | 5.2% | coding (1074/2145 nt) | PP_3557 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | = 4036076 | 52 (0.770) | coding (1127/2145 nt) | PP_3557 | methyl‑accepting chemotaxis transducer | |||||
CACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4035870‑4036023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataccagcAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTATTGAGCGCGTCAAGTTCCTGCTTCAGGGTTTCGGCCGGCCCGGTCAGGGCGTTTTCCGGCACATCCAGCAGCACGCCCCAGGGCTGG < NC_002947/4036076‑4035930 CACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATA > 2:209315/1‑149CACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATA > 7:329693/1‑149 TCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGC > 4:97960/1‑149 TCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACACGCTCAATACCAGC > 3:326529/1‑149 CACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGC < 8:233739/147‑1 CCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGC > 3:155830/1‑149 CCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTA < 4:155830/149‑1 GGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTATTGAG < 1:209315/149‑1 ACCAGCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTATTGAGCGCGTCAAGTTCCTGCTTCAGGGTTTCGGCCGGCCCGGTCAGGGCGTTTTCCGGCACATCCAGCAGCACGCCCCAGGG > 2:349667/1‑149 ACCAGCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTATTGAGCGCGTCAAGTTCCTGCTTCAGGGTTTCGGCCGGCCCGGTCAGGGCGTTTTCAGGCACATCCAGCAGCACGCCCCAGG > 4:6321/1‑148 CCAGCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTATTGAGCGCGTCAAGTTCCTGCTTCAGGGTTTCGGCCGGCCCGGTCAGGGCGTTTTCCGGCACATCCAGCAGCACGCCCCAGGGC > 4:58932/1‑149 GCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTATTGAGCGCGTCAAGTTCCTGCTTCAGGGTTTCGGCCGGCCCGGTCAGGGCGTTTTCCGGCACATCCAGCAGCACGCCCCAGGGCTGG < 8:387929/149‑1 GCAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGGGCCGCTGGTATTGAGCGCGTCAAGTTCCTGCTTCAGGGTTTCGGCCGGCCCGGTCAGGGCGTTTTCCGGCACATCCAGCAGCACGCCCCAGGGCTGG < 1:327381/149‑1 CACCCTCCACGACCGGCAGCGCTTGAAGGTGCTGGCGGCATTCCGGCCAATCCCGGACGCCCAGCCCTGGGGCGTGCTGCTGGATGTGCCGGAAAACGCCCTGACCGGGCCGGCCGAAACCCTGAAGCAGGAACTTGACGCGCTCAATACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4035870‑4036023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataccagcAGCAGGCCGACAATGGCGGCGGCCAGGCCCAGGCTCAGTTCCAGCAAGGTGCCGCTGGTATTGAGCGCGTCAAGTTCCTGCTTCAGGGTTTCGGCCGGCCCGGTCAGGGCGTTTTCCGGCACATCCAGCAGCACGCCCCAGGGCTGG < NC_002947/4036076‑4035930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |