| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4059271 = | 76 (1.060) | 4 (0.060) | 3/246 | NT | 5.0% | coding (1628/1638 nt) | pgm | phosphoglucomutase |
| ? | NC_002947 | 4059335 = | 82 (1.250) | coding (1564/1638 nt) | pgm | phosphoglucomutase | |||||
CAGGCGATTGGCGGGCTTAAGGTGATGACGGCCAATGGCTGGTTCGCCGCGCGCCCGTCGGGTACTGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4059428‑4059271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgatgaagcTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGCCAGCTC > NC_002947/4059335‑4059482 CAGGCGATTGGCGGGCTTAAGGTGATGACGGCCAATGGCTGGTTCGCCGCGCGCCCGTCGGGTACTGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGT < 8:172499/149‑1 AGGCGATTGGCGGGCTTAAGGTGATGACGGCCAATGGCTGGTTCGCCGCGCGCCCGTCGGGTACTGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTC > 5:207151/1‑149 GGCGGGCTTAAGGTGATGACGGCCAATGGCTGGTTCGCCGCGCGCCCGTCGGGTACTGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAG < 4:337732/148‑1 GCGGGCTTAAGGTGATGACGGCCAATGGCTTGTTCGACGCGCGCCCGTCGGGTACAGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGACGCGCATTAGCAGAGACTGGTGGAGGAAGCACAAGTGCTGTTCGATGAAGC > 6:431019/1‑148 TGATGACGGCCAATGGCTGGTTCGCCGCGCGCCCGTCGGGTACTGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGAT > 6:425064/1‑131 TGATGACGGCCAATGGCTGGTTCGCCGCGCGCCCGTCGGGTACTGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGAT < 5:425064/131‑1 CGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGC > 8:411932/1‑149 CGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTC < 3:212990/137‑1 CGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTC > 4:212990/1‑137 CATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGC < 7:411932/149‑1 GTCGATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCAC < 8:179468/149‑1 GATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGA > 4:317789/1‑125 GATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGA < 3:317789/125‑1 ATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGC < 6:417599/149‑1 ATGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGC < 2:26394/149‑1 TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGCC < 7:218326/149‑1 TGAAGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGC > 5:35660/1‑148 AGCTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGCCAGC > 1:153051/1‑149 AGCTTTCGGCGTAGATCTTGTAGATGTCTACAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGCCAGC > 1:254647/1‑149 CTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGCCAGCTC < 6:182451/149‑1 CTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGCCAGCTC > 8:79467/1‑149 CAGGCGATTGGCGGGCTTAAGGTGATGACGGCCAATGGCTGGTTCGCCGCGCGCCCGTCGGGTACTGAAGACATCTACAAGATCTACGCCGAAAGCTTCATCGACGAGGCGCATTTGCAGCGTCTGGTGGAGGAAGCACAAGTGCTGGTCGATGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4059428‑4059271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgatgaagcTTTCGGCGTAGATCTTGTAGATGTCTTCAGTACCCGACGGGCGCGCGGCGAACCAGCCATTGGCCGTCATCACCTTAAGCCCGCCAATCGCCTGGCCATTGCCTGGGGCGTGGCTGAGGATCTGCACGATCGGCTCACCGGCCAGCTC > NC_002947/4059335‑4059482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |