| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4129990 = | 66 (0.920) | 7 (0.100) | 6/258 | NT | 10.9% | coding (607/942 nt) | PP_3633 | ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase |
| ? | NC_002947 | 4130062 = | 51 (0.740) | coding (679/942 nt) | PP_3633 | ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase | |||||
CCGCACTGATGCAGAGGCATCACCTGAACATGGCGGGCACCCTGGTAATGCTGTTCCAGGCAGGCTTGCAAATGCTCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGC‑‑‑‑‑‑GCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4130138‑4129990‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gc‑‑‑‑‑‑gccGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGCGGTGCTGCGGCAAACCTCGACCCCGAGGCATTGAACGGCAGCAATGACCTGCGCCTGGCGTTGTACGCCA > NC_002947/4130062‑4130206 CCGCACTGATGCAGAGGCATCACCTGAACATGGCTGGCACCCTGGTAATGCTGTTCCAGGCAGGCTTGCAAATGCTCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGC‑‑‑‑‑‑GCC < 4:231824/149‑1 GCAAATGCTCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGCGCCATAGCCGGGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGC > 6:305438/1‑149 GCAAATGCTCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGCGCCATAGCCGGGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCAGGTTCAGGTGATGC > 6:409768/1‑149 AAATGCTCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGC‑‑‑‑‑‑GCCGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCAT > 1:299349/1‑149 CTCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGC‑‑‑‑‑‑GCCGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGT > 1:155216/1‑148 TCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGC‑‑‑‑‑‑GCCGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGC > 8:139114/1‑149 TCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGCGCCATAGCCGGGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGCTGTGCTGC < 5:305438/149‑1 CGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGC‑‑‑‑‑‑GCCGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGCGGTGCTGCGGCAATCCTCGACCCCGAG < 2:299349/149‑1 C‑‑‑‑‑‑GCCGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGCGGTGCTGCGGCAAACCTCGACCCCGAGGCATTGAACGGCAGCAATGACCTGCGCCTGGCGTTGTACGCCA < 3:391863/149‑1 CGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGCGGTGCTGCGGCAAAC > 7:326674/1‑91 CGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGCGGTGCTGCGGCAAAC < 8:326674/91‑1 CCGCACTGATGCAGAGGCATCACCTGAACATGGCGGGCACCCTGGTAATGCTGTTCCAGGCAGGCTTGCAAATGCTCGGCGCTGACCTGTCCAGGCAGCAGGCGAAGCTGCAGCGGAATGCTCAGCGCGATGCCTTGGCGGTAGGC‑‑‑‑‑‑GCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4130138‑4129990‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gc‑‑‑‑‑‑gccGAGCATTTGCAAGCCTGCCTGGAACAGCATTACCAGGGTGCCCGCCATGTTCAGGTGATGCCTCTGCATCAGTGCGGTGCTGCGGCAAACCTCGACCCCGAGGCATTGAACGGCAGCAATGACCTGCGCCTGGCGTTGTACGCCA > NC_002947/4130062‑4130206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |