New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4235852 =	61 (0.850)	5 (0.070)	4/260	NT	7.6%	coding (921/936 nt)	catA‑I	catechol 1,2‑dioxygenase
	?	NC_002947	4235890 =	62 (0.890)					coding (883/936 nt)	catA‑I	catechol 1,2‑dioxygenase

GGCTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4236003‑4235852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACAG  >  NC_002947/4235890‑4236037                                                                                                                                                                                                                                                                                                              GGCTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGG                                                                                                                                                         <  8:54746/149‑1   CTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGC                                                                                                                                                       <  3:317309/149‑1                                                                                                                AGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGA                                          >  2:396670/1‑149                                                                                                                AGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCCCATCCTCGACAAAACGCAGTTCGACG                                           >  3:156568/1‑148                                                                                                                 GTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGAT                                         >  8:651/1‑149                                                                                                                  TCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGACGCGAGCCGCCGCCGCATCCTCGCCAAAACGCAGTTCGCCGAT                                         >  4:363447/1‑148                                                                                                                                              GGCCGCGGGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAG             <  3:363447/148‑1                                                                                                                                                     GGCGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTAGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCA     <  1:123168/149‑1                                                                                                                                                       CGACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCA     >  4:330054/1‑147                                                                                                                                                        GACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACAG  >  2:164317/1‑149                                                                                                                                                                                                                                                                                                              GGCTGATCGGCGAACTGCGTTTTGTCGAGGATGCGGCGGCGGCGCGCGACCGCGGTGTGCAAGGCGAGCGCTTTGCCGAGCTGTCATTCGACTTCCGCTTGCAGGGTGCCAAGTCGCCTGACGCCGAGGCGCGAAGCCATCGGCCGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4236003‑4235852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgACTTGGCACCCTGCAAGCGGAAGTCGAATGACAGCTCGGCAAAGCGCTCGCCTTGCACACCGCGGTCGCGCGCCGCCGCCGCATCCTCGACAAAACGCAGTTCGCCGATCAGCCCGTCGCGGGTGGCATAGGCAAAGTCGTCCCACAG  >  NC_002947/4235890‑4236037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.