| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4294575 = | 69 (0.960) | 4 (0.060) | 4/252 | NT | 5.5% | coding (798/1302 nt) | opdN | outer‑membrane porin D |
| ? | NC_002947 | 4294610 = | 72 (1.070) | coding (763/1302 nt) | opdN | outer‑membrane porin D | |||||
AAGCCGACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4294729‑4294575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgacTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGG > NC_002947/4294610‑4294741 AAGCCGACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCG > 4:339087/1‑149 AGCCGACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGG < 1:106487/149‑1 AGCCGACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGG < 3:390520/149‑1 CCGACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCT > 7:193487/1‑149 CCGACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCT < 7:266733/149‑1 GACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGA > 4:76539/1‑149 GACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGA > 8:373450/1‑149 GCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAG > 7:321521/1‑149 CCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACA > 5:24274/1‑133 CCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACA < 6:24274/133‑1 GCAGCCTGTCGGCTGACTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGG < 8:321521/149‑1 AAGCCGACCACTTCGACCTGGCCGGTGTCGACTACCGTTTCAACGAGCGTTTCAGCGCCCAGTACCAAGTGGCCAAGCTGGAGAATATCTACCGCCAGCACTTCCTCGGCCTGGTGGCCAGTCAGCCGCTGCCGGTGGGCAGCCTGTCGGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4294729‑4294575‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgacTGGCCACCAGGCCGAGGAAGTGCTGGCGGTAGATATTCTCCAGCTTGGCCACTTGGTACTGGGCGCTGAAACGCTCGTTGAAACGGTAGTCGACACCGGCCAGGTCGAAGTGGTCGGCTTCGGTATCGCAGG > NC_002947/4294610‑4294741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |