New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4475019 =	84 (1.170)	6 (0.090)	6/254	NT	7.1%	coding (517/1536 nt)	PP_3964	transposase
	?	NC_002947	4475055 =	77 (1.130)					coding (481/1536 nt)	PP_3964	transposase

CCCGAAAACACCCAGTGCGTCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGCGGGGCAAATGGGCCTGTCGCCAGTGCGAAACCCTGATCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4475172‑4475019 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcccATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTCGGGTTCGTGACGAATCACCGTGCGTGGAAACTG  >  NC_002947/4475055‑4475202                                                                                                                                                                                                                                                                                                                CCCGAAAACACCCAGTGCGTCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGCGGGGCAAATGGGCCTGTCGCCAGTGCGAAACCCTGATCCA                                                                                                                                                           <  1:393751/149‑1   CGAAAACACCCAGTGCGTCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGCGGGGCAAATGGGCCTGTCGCCAGTGCGAAACCCTGATCCAGG                                                                                                                                                         <  7:224910/149‑1    GAAAACACCCAGTGCGTCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGCGGGGCAAATGGGCCTGTCGCCAGTGCGAAACACTGATCCAGGC                                                                                                                                                        >  3:62735/1‑149     AAAACACCCAGTGCGTCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGCGGGGCAAATGGGCCTGTCGCCAGTGCGAAACCCTGATCCAGGCC                                                                                                                                                       <  3:118599/149‑1                                                                                                                   AAATGGGCCTGTCGCCAGTGCGAAACCCTGATCCAGGCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGT                                         >  2:271418/1‑149                                                                                                                    AATGGGCCTGTCGCCAGTGCGAAACCCTGATCCAGGCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTG                                        >  8:206239/1‑149                                                                                                                      TGGGCCTGTCGCCAGTGCGAAACCCTGATCCAGGCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGATTCTCGCTGACGTCTTCTCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTT                                      >  7:145498/1‑149                                                                                                                       GGGCCTGTCGCCAGTGCGAAACCCTGATCCAGGCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTT                                     >  7:361155/1‑149                                                                                                                         GCCTGTCGCCAGTGCGAAACCCTGATCCAGGCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTC                                   <  8:361155/149‑1                                                                                                                                           ACCCTGATCCAGGCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTCGGGTTCGTGACGAATCAC                 <  7:206239/149‑1                                                                                                                                                    CAGGCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTCGGGTTCGTGACGAATCACCGTGCGTGG        <  5:197696/149‑1                                                                                                                                                       GCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTCGGGTTCGTGACGAATCACCGTGCGTGGAAA     >  8:12207/1‑149                                                                                                                                                       GCCCATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTCGGGTTCGTGACGAATCACCGTGCGTGGAA      >  2:286255/1‑148                                                                                                                                                          CATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTCGGGTTCGTGACGAATCACCGTGCGTGGAAACTG  <  6:256343/149‑1                                                                                                                                                                                                                                                                                                                CCCGAAAACACCCAGTGCGTCTGTGGCTGCCAACTTCAACGCATCGGCGAAGACGTCAGCGAGAAGCTGGATTACACGCCGGGCGTGTTTACCGTCGAGCAACATGTGCGGGGCAAATGGGCCTGTCGCCAGTGCGAAACCCTGATCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4475172‑4475019 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcccATTTGCCCCGCACATGTTGCTCGACGGTAAACACGCCCGGCGTGTAATCCAGCTTCTCGCTGACGTCTTCGCCGATGCGTTGAAGTTGGCAGCCACAGACGCACTGGGTGTTTTCGGGTTCGTGACGAATCACCGTGCGTGGAAACTG  >  NC_002947/4475055‑4475202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.