| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4520708 | 52 (0.730) | 4 (0.060) | 4/256 | NT | 6.9% | coding (1030/1257 nt) | icd | NADP(+)‑specific isocitrate dehydrogenase |
| ? | NC_002947 | = 4520754 | 58 (0.850) | coding (984/1257 nt) | icd | NADP(+)‑specific isocitrate dehydrogenase | |||||
TCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4520557‑4520708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCAGGACAAGGTCAACCCGGGCTCGGTGATCCTCTCGGCAGAGATGATGCTGCGCCACATGGGGTGGACCGAGGCCGCCG < NC_002947/4520754‑4520612 TCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGG > 4:15067/1‑149TCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCAGGGTTGACCTTGTCCTGCCCGGCATACTTGGG > 4:9201/1‑149 CGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGC > 7:214106/1‑149 CTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAA > 5:295923/1‑144 CTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAA < 6:295923/144‑1 CACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCC < 7:91805/135‑1 CACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCC > 8:91805/1‑135 GGGCGCCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCAGGACAAGGTCAACCCGGGCTCGGTGATCCTCTCGGCAGAGATGATGCTGCGCCACATGGGGTGGACCGAGGCCGCCG < 1:105755/149‑1 TCGTAGGTCACGGTCTTGGCCGCAATGGCGCCATTGGTGCCCTTGATGATCAGGTCGGCGGCCTCGGTCCACCCCATGTGGCGCAGCATCATCTCTGCCGAGAGGATCACCGAGCCCGGGTTGACCTTGTCCTGCCCGGCATACTTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4520557‑4520708‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcCAACCTGTCCGACACCGTGGCCATGTTCGAGGCCACTCACGGCACTGCGCCCAAGTATGCCGGGCAGGACAAGGTCAACCCGGGCTCGGTGATCCTCTCGGCAGAGATGATGCTGCGCCACATGGGGTGGACCGAGGCCGCCG < NC_002947/4520754‑4520612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |