New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4758391 | 77 (1.070) | 4 (0.060) | 4/258 | NT | 5.3% | coding (1393/1623 nt) | pvdP | pyoverdine biosynthesis‑like protein |
? | NC_002947 | = 4758496 | 68 (0.990) | coding (1288/1623 nt) | pvdP | pyoverdine biosynthesis‑like protein |
CTCCTCGTCGCTGTAAATCAGGCGCAAGGCCAGCTTCATGGTTTCCGGATCCATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4758239‑4758391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGCCGGGGCGCTGGGTGGAGGTCGCCGATCCTTGGCTGGGGC < NC_002947/4758496‑4758349 CTCCTCGTCGCTGTAAATCAGGCGCAAGGCCAGCTTCATGGTTTCCGGATCCATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCG < 7:324465/149‑1 TCCTCGTCGCTGTAAATCAGGCGCAAGGCCAGCTTCATGGTTTCCGGATCCATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGG > 5:211226/1‑149 CTCGTCGCTGTAAATCAGGCGCAAGGCCAGCTTCATGGTTTCCGGATCCATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCG > 3:379875/1‑149 CTCGTCGCTGTAAATCAGGCGCAAGGCCAGCTTCATGGTTTCCGGATCCATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCG > 7:255448/1‑149 CTGTAAATCAGGCGCAAGGCCAGCTTCATGGTTTCCGGATCCATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCTTCCAT > 1:39410/1‑149 GCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCTTTCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAA > 2:316781/1‑149 CCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCTTCCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGC < 2:39410/149‑1 AGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCTTTCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGCCG < 1:316781/149‑1 GCGCTTCCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGCCGGGGCGCTGGGTGGAGGTCGCCGATCCTTGGCTGG > 1:223446/1‑149 GCGCTTCCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGCCGGGGCGCTGGGTGGAGGTCGCCGATCCTTGGCTG < 4:94846/148‑1 GCTTCCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGCCGGGGCGCTGGGTGGAGGTCGCCGATCCTTGGCTGGGG > 5:178839/1‑149 CTTCCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGCCGGGGCGCTGCGTGGAGGTCGCCGATCCTTGGCTGGGGC < 1:242955/149‑1 CTCCTCGTCGCTGTAAATCAGGCGCAAGGCCAGCTTCATGGTTTCCGGATCCATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4758239‑4758391 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCCATGGCTGGATCGACGACCGTGTCGAGGACTGGTTCCGCGCCCATGAACGATTCCACCCTGGCGCAGTCGTGCGCCAGGAGGTCAATGGCGTGCCATGGTTCGCGCCGGGGCGCTGGGTGGAGGTCGCCGATCCTTGGCTGGGGC < NC_002947/4758496‑4758349 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |