New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4765593 | 69 (0.960) | 9 (0.130) | 8/256 | NT | 11.5% | coding (246/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
? | NC_002947 | = 4765635 | 73 (1.070) | coding (288/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
CAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4765471‑4765593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCT < NC_002947/4765635‑4765490 CAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCG > 3:153049/1‑149 GCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTGCAATGGAGCCAGCCGCGACAGGGCCGCGGCGGGCTCCATT < 7:323386/149‑1 AGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACC < 4:153049/149‑1 CGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGT < 2:291481/149‑1 CGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGT < 4:389918/149‑1 GGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGT < 3:395097/149‑1 GCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAG < 3:396247/147‑1 CAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCG > 7:288586/1‑140 CAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCG < 8:288586/140‑1 ACCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCG > 6:150708/1‑149 CCGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGGCAGCGG < 2:395201/149‑1 CGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGC < 8:359908/149‑1 CGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAAGCGCTGGCCAGCGG > 8:272872/1‑148 CGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTG < 7:16188/65‑1 CGGTACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTG > 8:16188/1‑65 GGTACCCTGCAG‑CAGCCGCGACAGGGACGCGGCGGGCTCCATTGCACCGTTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCT < 7:157328/149‑1 CAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4765471‑4765593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAG‑CAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCT < NC_002947/4765635‑4765490 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |